Gene : Cagra.0448s0008 C. grandiflora v1.1
Defline:  (1 of 5) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  8
Name:  ? Cagra.0448s0008 Secondary Identifier:  ? PAC:28906341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0008 0.5kb upstream 0.5kb upstream 4320 true Scaffold448: 27074-31393 Capsella grandiflora
Cagra.0448s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 27074-27573 Capsella grandiflora
Cagra.0448s0008 0.5kb downstream 0.5kb downstream 4320 true Scaffold448: 27574-31893 Capsella grandiflora
Cagra.0448s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 31394-31893 Capsella grandiflora
Cagra.0448s0008 1.0kb upstream 1.0kb upstream 4820 true Scaffold448: 26574-31393 Capsella grandiflora
Cagra.0448s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 26574-27573 Capsella grandiflora
Cagra.0448s0008 1.0kb downstream 1.0kb downstream 4820 true Scaffold448: 27574-32393 Capsella grandiflora
Cagra.0448s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 31394-32393 Capsella grandiflora
Cagra.0448s0008 2.0kb upstream 2.0kb upstream 5820 true Scaffold448: 25574-31393 Capsella grandiflora
Cagra.0448s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 25574-27573 Capsella grandiflora
Cagra.0448s0008 2.0kb downstream 2.0kb downstream 5820 true Scaffold448: 27574-33393 Capsella grandiflora
Cagra.0448s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 31394-33393 Capsella grandiflora
Cagra.0448s0008 5.0kb upstream 5.0kb upstream 8820 true Scaffold448: 22574-31393 Capsella grandiflora
Cagra.0448s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 22574-27573 Capsella grandiflora
Cagra.0448s0008 5.0kb downstream 5.0kb downstream 8820 true Scaffold448: 27574-36393 Capsella grandiflora
Cagra.0448s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 31394-36393 Capsella grandiflora
Cagra.0448s0008 10.0kb upstream 10.0kb upstream 13820 true Scaffold448: 17574-31393 Capsella grandiflora
Cagra.0448s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 17574-27573 Capsella grandiflora
Cagra.0448s0008 10.0kb downstream 10.0kb downstream 13820 true Scaffold448: 27574-41393 Capsella grandiflora
Cagra.0448s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 31394-41393 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124298514 5266 SBM View MSA
122376213 5261 Brassicaceae View MSA
123801181 5264 Brassicales-Malvales View MSA
124150139 5268 Malvidae View MSA
123875811 5270 Rosid View MSA
123459578 5271 Pentapetalae View MSA
122494968 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain