Gene : Cagra.0068s0014 C. grandiflora v1.1
Defline:  (1 of 3) PTHR32370:SF26 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY3-RELATED Genomic Order:  14
Name:  ? Cagra.0068s0014 Secondary Identifier:  ? PAC:28916344
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0068s0014 0.5kb upstream 0.5kb upstream 2216 true Scaffold68: 51259-53474 Capsella grandiflora
Cagra.0068s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold68: 52975-53474 Capsella grandiflora
Cagra.0068s0014 0.5kb downstream 0.5kb downstream 2216 true Scaffold68: 50759-52974 Capsella grandiflora
Cagra.0068s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold68: 50759-51258 Capsella grandiflora
Cagra.0068s0014 1.0kb upstream 1.0kb upstream 2716 true Scaffold68: 51259-53974 Capsella grandiflora
Cagra.0068s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold68: 52975-53974 Capsella grandiflora
Cagra.0068s0014 1.0kb downstream 1.0kb downstream 2716 true Scaffold68: 50259-52974 Capsella grandiflora
Cagra.0068s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold68: 50259-51258 Capsella grandiflora
Cagra.0068s0014 2.0kb upstream 2.0kb upstream 3716 true Scaffold68: 51259-54974 Capsella grandiflora
Cagra.0068s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold68: 52975-54974 Capsella grandiflora
Cagra.0068s0014 2.0kb downstream 2.0kb downstream 3716 true Scaffold68: 49259-52974 Capsella grandiflora
Cagra.0068s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold68: 49259-51258 Capsella grandiflora
Cagra.0068s0014 5.0kb upstream 5.0kb upstream 6678 true Scaffold68: 51259-57936 Capsella grandiflora
Cagra.0068s0014 5.0kb upstream 5.0kb upstream 4962 false Scaffold68: 52975-57936 Capsella grandiflora
Cagra.0068s0014 5.0kb downstream 5.0kb downstream 6716 true Scaffold68: 46259-52974 Capsella grandiflora
Cagra.0068s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold68: 46259-51258 Capsella grandiflora
Cagra.0068s0014 10.0kb upstream 10.0kb upstream 6678 true Scaffold68: 51259-57936 Capsella grandiflora
Cagra.0068s0014 10.0kb upstream 10.0kb upstream 4962 false Scaffold68: 52975-57936 Capsella grandiflora
Cagra.0068s0014 10.0kb downstream 10.0kb downstream 11716 true Scaffold68: 41259-52974 Capsella grandiflora
Cagra.0068s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold68: 41259-51258 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373939 5261 Brassicaceae View MSA
123841801 5264 Brassicales-Malvales View MSA
124323035 5266 SBM View MSA
124169302 5268 Malvidae View MSA
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain