Gene : Cagra.0069s0005 C. grandiflora v1.1
Defline:  (1 of 4) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  5
Name:  ? Cagra.0069s0005 Secondary Identifier:  ? PAC:28912135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0069s0005 0.5kb upstream 0.5kb upstream 4338 true Scaffold69: 20459-24796 Capsella grandiflora
Cagra.0069s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold69: 24297-24796 Capsella grandiflora
Cagra.0069s0005 0.5kb downstream 0.5kb downstream 4338 true Scaffold69: 19959-24296 Capsella grandiflora
Cagra.0069s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold69: 19959-20458 Capsella grandiflora
Cagra.0069s0005 1.0kb upstream 1.0kb upstream 4838 true Scaffold69: 20459-25296 Capsella grandiflora
Cagra.0069s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold69: 24297-25296 Capsella grandiflora
Cagra.0069s0005 1.0kb downstream 1.0kb downstream 4838 true Scaffold69: 19459-24296 Capsella grandiflora
Cagra.0069s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold69: 19459-20458 Capsella grandiflora
Cagra.0069s0005 2.0kb upstream 2.0kb upstream 5838 true Scaffold69: 20459-26296 Capsella grandiflora
Cagra.0069s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold69: 24297-26296 Capsella grandiflora
Cagra.0069s0005 2.0kb downstream 2.0kb downstream 5838 true Scaffold69: 18459-24296 Capsella grandiflora
Cagra.0069s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold69: 18459-20458 Capsella grandiflora
Cagra.0069s0005 5.0kb upstream 5.0kb upstream 8838 true Scaffold69: 20459-29296 Capsella grandiflora
Cagra.0069s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold69: 24297-29296 Capsella grandiflora
Cagra.0069s0005 5.0kb downstream 5.0kb downstream 8838 true Scaffold69: 15459-24296 Capsella grandiflora
Cagra.0069s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold69: 15459-20458 Capsella grandiflora
Cagra.0069s0005 10.0kb upstream 10.0kb upstream 11601 true Scaffold69: 20459-32059 Capsella grandiflora
Cagra.0069s0005 10.0kb upstream 10.0kb upstream 7763 false Scaffold69: 24297-32059 Capsella grandiflora
Cagra.0069s0005 10.0kb downstream 10.0kb downstream 13838 true Scaffold69: 10459-24296 Capsella grandiflora
Cagra.0069s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold69: 10459-20458 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377393 5261 Brassicaceae View MSA
123836440 5264 Brassicales-Malvales View MSA
124343009 5266 SBM View MSA
124239372 5268 Malvidae View MSA
124064535 5270 Rosid View MSA
123751271 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain