Gene : Cagra.0076s0004 C. grandiflora v1.1
Defline:  (1 of 64) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.0076s0004 Secondary Identifier:  ? PAC:28913413
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0076s0004 0.5kb upstream 0.5kb upstream 3172 true Scaffold76: 10775-13946 Capsella grandiflora
Cagra.0076s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold76: 13447-13946 Capsella grandiflora
Cagra.0076s0004 0.5kb downstream 0.5kb downstream 3172 true Scaffold76: 10275-13446 Capsella grandiflora
Cagra.0076s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold76: 10275-10774 Capsella grandiflora
Cagra.0076s0004 1.0kb upstream 1.0kb upstream 3672 true Scaffold76: 10775-14446 Capsella grandiflora
Cagra.0076s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold76: 13447-14446 Capsella grandiflora
Cagra.0076s0004 1.0kb downstream 1.0kb downstream 3672 true Scaffold76: 9775-13446 Capsella grandiflora
Cagra.0076s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold76: 9775-10774 Capsella grandiflora
Cagra.0076s0004 2.0kb upstream 2.0kb upstream 4054 true Scaffold76: 10775-14828 Capsella grandiflora
Cagra.0076s0004 2.0kb upstream 2.0kb upstream 1382 false Scaffold76: 13447-14828 Capsella grandiflora
Cagra.0076s0004 2.0kb downstream 2.0kb downstream 4672 true Scaffold76: 8775-13446 Capsella grandiflora
Cagra.0076s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold76: 8775-10774 Capsella grandiflora
Cagra.0076s0004 5.0kb upstream 5.0kb upstream 4054 true Scaffold76: 10775-14828 Capsella grandiflora
Cagra.0076s0004 5.0kb upstream 5.0kb upstream 1382 false Scaffold76: 13447-14828 Capsella grandiflora
Cagra.0076s0004 5.0kb downstream 5.0kb downstream 7672 true Scaffold76: 5775-13446 Capsella grandiflora
Cagra.0076s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold76: 5775-10774 Capsella grandiflora
Cagra.0076s0004 10.0kb upstream 10.0kb upstream 4054 true Scaffold76: 10775-14828 Capsella grandiflora
Cagra.0076s0004 10.0kb upstream 10.0kb upstream 1382 false Scaffold76: 13447-14828 Capsella grandiflora
Cagra.0076s0004 10.0kb downstream 10.0kb downstream 12672 true Scaffold76: 775-13446 Capsella grandiflora
Cagra.0076s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold76: 775-10774 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377625 5261 Brassicaceae View MSA
123832693 5264 Brassicales-Malvales View MSA
124350505 5266 SBM View MSA
124245070 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain