Gene : Cagra.0083s0014 C. grandiflora v1.1
Defline:  (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  14
Name:  ? Cagra.0083s0014 Secondary Identifier:  ? PAC:28913561
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0083s0014 0.5kb upstream 0.5kb upstream 1828 true Scaffold83: 53378-55205 Capsella grandiflora
Cagra.0083s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold83: 53378-53877 Capsella grandiflora
Cagra.0083s0014 0.5kb downstream 0.5kb downstream 1329 true Scaffold83: 53878-55206 Capsella grandiflora
Cagra.0083s0014 0.5kb downstream 0.5kb downstream 1 false Scaffold83: 55206-55206 Capsella grandiflora
Cagra.0083s0014 1.0kb upstream 1.0kb upstream 2328 true Scaffold83: 52878-55205 Capsella grandiflora
Cagra.0083s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold83: 52878-53877 Capsella grandiflora
Cagra.0083s0014 1.0kb downstream 1.0kb downstream 1329 true Scaffold83: 53878-55206 Capsella grandiflora
Cagra.0083s0014 1.0kb downstream 1.0kb downstream 1 false Scaffold83: 55206-55206 Capsella grandiflora
Cagra.0083s0014 2.0kb upstream 2.0kb upstream 3328 true Scaffold83: 51878-55205 Capsella grandiflora
Cagra.0083s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold83: 51878-53877 Capsella grandiflora
Cagra.0083s0014 2.0kb downstream 2.0kb downstream 1329 true Scaffold83: 53878-55206 Capsella grandiflora
Cagra.0083s0014 2.0kb downstream 2.0kb downstream 1 false Scaffold83: 55206-55206 Capsella grandiflora
Cagra.0083s0014 5.0kb upstream 5.0kb upstream 6328 true Scaffold83: 48878-55205 Capsella grandiflora
Cagra.0083s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold83: 48878-53877 Capsella grandiflora
Cagra.0083s0014 5.0kb downstream 5.0kb downstream 1329 true Scaffold83: 53878-55206 Capsella grandiflora
Cagra.0083s0014 5.0kb downstream 5.0kb downstream 1 false Scaffold83: 55206-55206 Capsella grandiflora
Cagra.0083s0014 10.0kb upstream 10.0kb upstream 11328 true Scaffold83: 43878-55205 Capsella grandiflora
Cagra.0083s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold83: 43878-53877 Capsella grandiflora
Cagra.0083s0014 10.0kb downstream 10.0kb downstream 1329 true Scaffold83: 53878-55206 Capsella grandiflora
Cagra.0083s0014 10.0kb downstream 10.0kb downstream 1 false Scaffold83: 55206-55206 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334375 5261 Brassicaceae Singleton cluster - no MSA
123775220 5264 Brassicales-Malvales Singleton cluster - no MSA
124273633 5266 SBM Singleton cluster - no MSA
124249680 5268 Malvidae View MSA
124061793 5270 Rosid View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain