Gene : Cagra.0086s0030 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22814//PTHR22814:SF52 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Genomic Order:  30
Name:  ? Cagra.0086s0030 Secondary Identifier:  ? PAC:28918453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0086s0030 0.5kb upstream 0.5kb upstream 1581 true Scaffold86: 111126-112706 Capsella grandiflora
Cagra.0086s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold86: 111126-111625 Capsella grandiflora
Cagra.0086s0030 0.5kb downstream 0.5kb downstream 1581 true Scaffold86: 111626-113206 Capsella grandiflora
Cagra.0086s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold86: 112707-113206 Capsella grandiflora
Cagra.0086s0030 1.0kb upstream 1.0kb upstream 2081 true Scaffold86: 110626-112706 Capsella grandiflora
Cagra.0086s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold86: 110626-111625 Capsella grandiflora
Cagra.0086s0030 1.0kb downstream 1.0kb downstream 2081 true Scaffold86: 111626-113706 Capsella grandiflora
Cagra.0086s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold86: 112707-113706 Capsella grandiflora
Cagra.0086s0030 2.0kb upstream 2.0kb upstream 3081 true Scaffold86: 109626-112706 Capsella grandiflora
Cagra.0086s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold86: 109626-111625 Capsella grandiflora
Cagra.0086s0030 2.0kb downstream 2.0kb downstream 3081 true Scaffold86: 111626-114706 Capsella grandiflora
Cagra.0086s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold86: 112707-114706 Capsella grandiflora
Cagra.0086s0030 5.0kb upstream 5.0kb upstream 6081 true Scaffold86: 106626-112706 Capsella grandiflora
Cagra.0086s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold86: 106626-111625 Capsella grandiflora
Cagra.0086s0030 5.0kb downstream 5.0kb downstream 6081 true Scaffold86: 111626-117706 Capsella grandiflora
Cagra.0086s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold86: 112707-117706 Capsella grandiflora
Cagra.0086s0030 10.0kb upstream 10.0kb upstream 11081 true Scaffold86: 101626-112706 Capsella grandiflora
Cagra.0086s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold86: 101626-111625 Capsella grandiflora
Cagra.0086s0030 10.0kb downstream 10.0kb downstream 11081 true Scaffold86: 111626-122706 Capsella grandiflora
Cagra.0086s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold86: 112707-122706 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377958 5261 Brassicaceae View MSA
123841418 5264 Brassicales-Malvales View MSA
124337058 5266 SBM View MSA
124246910 5268 Malvidae View MSA
124061014 5270 Rosid View MSA
123749167 5271 Pentapetalae View MSA
122790653 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain