Gene : Cagra.0053s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31515:SF0 - TRANSMEMBRANE PROTEIN Genomic Order:  4
Name:  ? Cagra.0053s0004 Secondary Identifier:  ? PAC:28907031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0053s0004 0.5kb upstream 0.5kb upstream 6144 true Scaffold53: 3843-9986 Capsella grandiflora
Cagra.0053s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold53: 3843-4342 Capsella grandiflora
Cagra.0053s0004 0.5kb downstream 0.5kb downstream 6144 true Scaffold53: 4343-10486 Capsella grandiflora
Cagra.0053s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold53: 9987-10486 Capsella grandiflora
Cagra.0053s0004 1.0kb upstream 1.0kb upstream 6644 true Scaffold53: 3343-9986 Capsella grandiflora
Cagra.0053s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold53: 3343-4342 Capsella grandiflora
Cagra.0053s0004 1.0kb downstream 1.0kb downstream 6644 true Scaffold53: 4343-10986 Capsella grandiflora
Cagra.0053s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold53: 9987-10986 Capsella grandiflora
Cagra.0053s0004 2.0kb upstream 2.0kb upstream 7644 true Scaffold53: 2343-9986 Capsella grandiflora
Cagra.0053s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold53: 2343-4342 Capsella grandiflora
Cagra.0053s0004 2.0kb downstream 2.0kb downstream 7644 true Scaffold53: 4343-11986 Capsella grandiflora
Cagra.0053s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold53: 9987-11986 Capsella grandiflora
Cagra.0053s0004 5.0kb upstream 5.0kb upstream 9986 true Scaffold53: 1-9986 Capsella grandiflora
Cagra.0053s0004 5.0kb upstream 5.0kb upstream 4342 false Scaffold53: 1-4342 Capsella grandiflora
Cagra.0053s0004 5.0kb downstream 5.0kb downstream 10644 true Scaffold53: 4343-14986 Capsella grandiflora
Cagra.0053s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold53: 9987-14986 Capsella grandiflora
Cagra.0053s0004 10.0kb upstream 10.0kb upstream 9986 true Scaffold53: 1-9986 Capsella grandiflora
Cagra.0053s0004 10.0kb upstream 10.0kb upstream 4342 false Scaffold53: 1-4342 Capsella grandiflora
Cagra.0053s0004 10.0kb downstream 10.0kb downstream 15644 true Scaffold53: 4343-19986 Capsella grandiflora
Cagra.0053s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold53: 9987-19986 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365734 5261 Brassicaceae View MSA
123828396 5264 Brassicales-Malvales View MSA
124344433 5266 SBM View MSA
124242956 5268 Malvidae View MSA
124071230 5270 Rosid View MSA
123736708 5271 Pentapetalae View MSA
122793192 5272 Eudicot View MSA
122047868 5273 Angiosperm View MSA
121343983 5274 Embryophyte View MSA
123425193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain