Gene : Cagra.0053s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR34804:SF1 - CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN Genomic Order:  11
Name:  ? Cagra.0053s0011 Secondary Identifier:  ? PAC:28907007
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0053s0011 0.5kb upstream 0.5kb upstream 2795 true Scaffold53: 36761-39555 Capsella grandiflora
Cagra.0053s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold53: 36761-37260 Capsella grandiflora
Cagra.0053s0011 0.5kb downstream 0.5kb downstream 2795 true Scaffold53: 37261-40055 Capsella grandiflora
Cagra.0053s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold53: 39556-40055 Capsella grandiflora
Cagra.0053s0011 1.0kb upstream 1.0kb upstream 3295 true Scaffold53: 36261-39555 Capsella grandiflora
Cagra.0053s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold53: 36261-37260 Capsella grandiflora
Cagra.0053s0011 1.0kb downstream 1.0kb downstream 3295 true Scaffold53: 37261-40555 Capsella grandiflora
Cagra.0053s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold53: 39556-40555 Capsella grandiflora
Cagra.0053s0011 2.0kb upstream 2.0kb upstream 4295 true Scaffold53: 35261-39555 Capsella grandiflora
Cagra.0053s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold53: 35261-37260 Capsella grandiflora
Cagra.0053s0011 2.0kb downstream 2.0kb downstream 4295 true Scaffold53: 37261-41555 Capsella grandiflora
Cagra.0053s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold53: 39556-41555 Capsella grandiflora
Cagra.0053s0011 5.0kb upstream 5.0kb upstream 7295 true Scaffold53: 32261-39555 Capsella grandiflora
Cagra.0053s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold53: 32261-37260 Capsella grandiflora
Cagra.0053s0011 5.0kb downstream 5.0kb downstream 7295 true Scaffold53: 37261-44555 Capsella grandiflora
Cagra.0053s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold53: 39556-44555 Capsella grandiflora
Cagra.0053s0011 10.0kb upstream 10.0kb upstream 12295 true Scaffold53: 27261-39555 Capsella grandiflora
Cagra.0053s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold53: 27261-37260 Capsella grandiflora
Cagra.0053s0011 10.0kb downstream 10.0kb downstream 12295 true Scaffold53: 37261-49555 Capsella grandiflora
Cagra.0053s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold53: 39556-49555 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370836 5261 Brassicaceae View MSA
123831260 5264 Brassicales-Malvales View MSA
124344293 5266 SBM View MSA
124250509 5268 Malvidae View MSA
124060714 5270 Rosid View MSA
123751863 5271 Pentapetalae View MSA
122795534 5272 Eudicot View MSA
122049518 5273 Angiosperm View MSA
121345804 5274 Embryophyte View MSA
123427885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain