Gene : Cagra.0053s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR26402:SF617 - TWO-COMPONENT RESPONSE REGULATOR ARR1-RELATED Genomic Order:  18
Name:  ? Cagra.0053s0018 Secondary Identifier:  ? PAC:28907010
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0053s0018 0.5kb upstream 0.5kb upstream 4189 true Scaffold53: 66254-70442 Capsella grandiflora
Cagra.0053s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold53: 69943-70442 Capsella grandiflora
Cagra.0053s0018 0.5kb downstream 0.5kb downstream 4189 true Scaffold53: 65754-69942 Capsella grandiflora
Cagra.0053s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold53: 65754-66253 Capsella grandiflora
Cagra.0053s0018 1.0kb upstream 1.0kb upstream 4689 true Scaffold53: 66254-70942 Capsella grandiflora
Cagra.0053s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold53: 69943-70942 Capsella grandiflora
Cagra.0053s0018 1.0kb downstream 1.0kb downstream 4689 true Scaffold53: 65254-69942 Capsella grandiflora
Cagra.0053s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold53: 65254-66253 Capsella grandiflora
Cagra.0053s0018 2.0kb upstream 2.0kb upstream 5689 true Scaffold53: 66254-71942 Capsella grandiflora
Cagra.0053s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold53: 69943-71942 Capsella grandiflora
Cagra.0053s0018 2.0kb downstream 2.0kb downstream 5689 true Scaffold53: 64254-69942 Capsella grandiflora
Cagra.0053s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold53: 64254-66253 Capsella grandiflora
Cagra.0053s0018 5.0kb upstream 5.0kb upstream 8689 true Scaffold53: 66254-74942 Capsella grandiflora
Cagra.0053s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold53: 69943-74942 Capsella grandiflora
Cagra.0053s0018 5.0kb downstream 5.0kb downstream 8689 true Scaffold53: 61254-69942 Capsella grandiflora
Cagra.0053s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold53: 61254-66253 Capsella grandiflora
Cagra.0053s0018 10.0kb upstream 10.0kb upstream 13689 true Scaffold53: 66254-79942 Capsella grandiflora
Cagra.0053s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold53: 69943-79942 Capsella grandiflora
Cagra.0053s0018 10.0kb downstream 10.0kb downstream 13689 true Scaffold53: 56254-69942 Capsella grandiflora
Cagra.0053s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold53: 56254-66253 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368385 5261 Brassicaceae View MSA
123837338 5264 Brassicales-Malvales View MSA
124344125 5266 SBM View MSA
124241603 5268 Malvidae View MSA
124061733 5270 Rosid View MSA
123739139 5271 Pentapetalae View MSA
122791223 5272 Eudicot View MSA
122048546 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain