Gene : Cagra.0053s0017 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31052:SF3 - COBRA-LIKE PROTEIN 7-RELATED Genomic Order:  17
Name:  ? Cagra.0053s0017 Secondary Identifier:  ? PAC:28907028
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0053s0017 0.5kb upstream 0.5kb upstream 3508 true Scaffold53: 62610-66117 Capsella grandiflora
Cagra.0053s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold53: 62610-63109 Capsella grandiflora
Cagra.0053s0017 0.5kb downstream 0.5kb downstream 3508 true Scaffold53: 63110-66617 Capsella grandiflora
Cagra.0053s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold53: 66118-66617 Capsella grandiflora
Cagra.0053s0017 1.0kb upstream 1.0kb upstream 4008 true Scaffold53: 62110-66117 Capsella grandiflora
Cagra.0053s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold53: 62110-63109 Capsella grandiflora
Cagra.0053s0017 1.0kb downstream 1.0kb downstream 4008 true Scaffold53: 63110-67117 Capsella grandiflora
Cagra.0053s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold53: 66118-67117 Capsella grandiflora
Cagra.0053s0017 2.0kb upstream 2.0kb upstream 5008 true Scaffold53: 61110-66117 Capsella grandiflora
Cagra.0053s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold53: 61110-63109 Capsella grandiflora
Cagra.0053s0017 2.0kb downstream 2.0kb downstream 5008 true Scaffold53: 63110-68117 Capsella grandiflora
Cagra.0053s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold53: 66118-68117 Capsella grandiflora
Cagra.0053s0017 5.0kb upstream 5.0kb upstream 8008 true Scaffold53: 58110-66117 Capsella grandiflora
Cagra.0053s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold53: 58110-63109 Capsella grandiflora
Cagra.0053s0017 5.0kb downstream 5.0kb downstream 8008 true Scaffold53: 63110-71117 Capsella grandiflora
Cagra.0053s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold53: 66118-71117 Capsella grandiflora
Cagra.0053s0017 10.0kb upstream 10.0kb upstream 13008 true Scaffold53: 53110-66117 Capsella grandiflora
Cagra.0053s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold53: 53110-63109 Capsella grandiflora
Cagra.0053s0017 10.0kb downstream 10.0kb downstream 13008 true Scaffold53: 63110-76117 Capsella grandiflora
Cagra.0053s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold53: 66118-76117 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370662 5261 Brassicaceae View MSA
123831591 5264 Brassicales-Malvales View MSA
124343751 5266 SBM View MSA
124238532 5268 Malvidae View MSA
124061230 5270 Rosid View MSA
123750935 5271 Pentapetalae View MSA
122797556 5272 Eudicot View MSA
122048616 5273 Angiosperm View MSA
121351657 5274 Embryophyte View MSA
123382264 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain