Gene : Cagra.0056s0005 C. grandiflora v1.1
Genomic Order:  5 Name:  ? Cagra.0056s0005
Secondary Identifier:  ? PAC:28903227
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0056s0005 0.5kb upstream 0.5kb upstream 1670 true Scaffold56: 13983-15652 Capsella grandiflora
Cagra.0056s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold56: 15153-15652 Capsella grandiflora
Cagra.0056s0005 0.5kb downstream 0.5kb downstream 1670 true Scaffold56: 13483-15152 Capsella grandiflora
Cagra.0056s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold56: 13483-13982 Capsella grandiflora
Cagra.0056s0005 1.0kb upstream 1.0kb upstream 2170 true Scaffold56: 13983-16152 Capsella grandiflora
Cagra.0056s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold56: 15153-16152 Capsella grandiflora
Cagra.0056s0005 1.0kb downstream 1.0kb downstream 2170 true Scaffold56: 12983-15152 Capsella grandiflora
Cagra.0056s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold56: 12983-13982 Capsella grandiflora
Cagra.0056s0005 2.0kb upstream 2.0kb upstream 3170 true Scaffold56: 13983-17152 Capsella grandiflora
Cagra.0056s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold56: 15153-17152 Capsella grandiflora
Cagra.0056s0005 2.0kb downstream 2.0kb downstream 3170 true Scaffold56: 11983-15152 Capsella grandiflora
Cagra.0056s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold56: 11983-13982 Capsella grandiflora
Cagra.0056s0005 5.0kb upstream 5.0kb upstream 6170 true Scaffold56: 13983-20152 Capsella grandiflora
Cagra.0056s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold56: 15153-20152 Capsella grandiflora
Cagra.0056s0005 5.0kb downstream 5.0kb downstream 6170 true Scaffold56: 8983-15152 Capsella grandiflora
Cagra.0056s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold56: 8983-13982 Capsella grandiflora
Cagra.0056s0005 10.0kb upstream 10.0kb upstream 11170 true Scaffold56: 13983-25152 Capsella grandiflora
Cagra.0056s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold56: 15153-25152 Capsella grandiflora
Cagra.0056s0005 10.0kb downstream 10.0kb downstream 11170 true Scaffold56: 3983-15152 Capsella grandiflora
Cagra.0056s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold56: 3983-13982 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373227 5261 Brassicaceae View MSA
123839419 5264 Brassicales-Malvales View MSA
124349249 5266 SBM View MSA
124250850 5268 Malvidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain