Gene : Cagra.0061s0001 C. grandiflora v1.1
Defline:  (1 of 4) PTHR24007 - BRCA1-ASSOCIATED PROTEIN Genomic Order:  1
Name:  ? Cagra.0061s0001 Secondary Identifier:  ? PAC:28905247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0061s0001 0.5kb upstream 0.5kb upstream 1492 true Scaffold61: 1-1492 Capsella grandiflora
Cagra.0061s0001 0.5kb upstream 0.5kb upstream 321 false Scaffold61: 1-321 Capsella grandiflora
Cagra.0061s0001 0.5kb downstream 0.5kb downstream 1671 true Scaffold61: 322-1992 Capsella grandiflora
Cagra.0061s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold61: 1493-1992 Capsella grandiflora
Cagra.0061s0001 1.0kb upstream 1.0kb upstream 1492 true Scaffold61: 1-1492 Capsella grandiflora
Cagra.0061s0001 1.0kb upstream 1.0kb upstream 321 false Scaffold61: 1-321 Capsella grandiflora
Cagra.0061s0001 1.0kb downstream 1.0kb downstream 2171 true Scaffold61: 322-2492 Capsella grandiflora
Cagra.0061s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold61: 1493-2492 Capsella grandiflora
Cagra.0061s0001 2.0kb upstream 2.0kb upstream 1492 true Scaffold61: 1-1492 Capsella grandiflora
Cagra.0061s0001 2.0kb upstream 2.0kb upstream 321 false Scaffold61: 1-321 Capsella grandiflora
Cagra.0061s0001 2.0kb downstream 2.0kb downstream 3171 true Scaffold61: 322-3492 Capsella grandiflora
Cagra.0061s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold61: 1493-3492 Capsella grandiflora
Cagra.0061s0001 5.0kb upstream 5.0kb upstream 1492 true Scaffold61: 1-1492 Capsella grandiflora
Cagra.0061s0001 5.0kb upstream 5.0kb upstream 321 false Scaffold61: 1-321 Capsella grandiflora
Cagra.0061s0001 5.0kb downstream 5.0kb downstream 6171 true Scaffold61: 322-6492 Capsella grandiflora
Cagra.0061s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold61: 1493-6492 Capsella grandiflora
Cagra.0061s0001 10.0kb upstream 10.0kb upstream 1492 true Scaffold61: 1-1492 Capsella grandiflora
Cagra.0061s0001 10.0kb upstream 10.0kb upstream 321 false Scaffold61: 1-321 Capsella grandiflora
Cagra.0061s0001 10.0kb downstream 10.0kb downstream 7338 true Scaffold61: 322-7659 Capsella grandiflora
Cagra.0061s0001 10.0kb downstream 10.0kb downstream 6167 false Scaffold61: 1493-7659 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122375875 5261 Brassicaceae View MSA
123801079 5264 Brassicales-Malvales View MSA
124298420 5266 SBM View MSA
124150069 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain