Gene : Cagra.0050s0054 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12428//PTHR12428:SF23 - OXA1 Genomic Order:  54
Name:  ? Cagra.0050s0054 Secondary Identifier:  ? PAC:28917061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0054 0.5kb upstream 0.5kb upstream 3240 true Scaffold50: 230377-233616 Capsella grandiflora
Cagra.0050s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 233117-233616 Capsella grandiflora
Cagra.0050s0054 0.5kb downstream 0.5kb downstream 3240 true Scaffold50: 229877-233116 Capsella grandiflora
Cagra.0050s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 229877-230376 Capsella grandiflora
Cagra.0050s0054 1.0kb upstream 1.0kb upstream 3740 true Scaffold50: 230377-234116 Capsella grandiflora
Cagra.0050s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 233117-234116 Capsella grandiflora
Cagra.0050s0054 1.0kb downstream 1.0kb downstream 3740 true Scaffold50: 229377-233116 Capsella grandiflora
Cagra.0050s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 229377-230376 Capsella grandiflora
Cagra.0050s0054 2.0kb upstream 2.0kb upstream 4740 true Scaffold50: 230377-235116 Capsella grandiflora
Cagra.0050s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 233117-235116 Capsella grandiflora
Cagra.0050s0054 2.0kb downstream 2.0kb downstream 4740 true Scaffold50: 228377-233116 Capsella grandiflora
Cagra.0050s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 228377-230376 Capsella grandiflora
Cagra.0050s0054 5.0kb upstream 5.0kb upstream 7740 true Scaffold50: 230377-238116 Capsella grandiflora
Cagra.0050s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 233117-238116 Capsella grandiflora
Cagra.0050s0054 5.0kb downstream 5.0kb downstream 7740 true Scaffold50: 225377-233116 Capsella grandiflora
Cagra.0050s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 225377-230376 Capsella grandiflora
Cagra.0050s0054 10.0kb upstream 10.0kb upstream 12740 true Scaffold50: 230377-243116 Capsella grandiflora
Cagra.0050s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 233117-243116 Capsella grandiflora
Cagra.0050s0054 10.0kb downstream 10.0kb downstream 12740 true Scaffold50: 220377-233116 Capsella grandiflora
Cagra.0050s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 220377-230376 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377585 5261 Brassicaceae View MSA
123801573 5264 Brassicales-Malvales View MSA
124298859 5266 SBM View MSA
124150406 5268 Malvidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain