Gene : Cagra.0050s0047 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10997:SF8 - EXPORTIN-2 Genomic Order:  47
Name:  ? Cagra.0050s0047 Secondary Identifier:  ? PAC:28917063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0047 0.5kb upstream 0.5kb upstream 4044 true Scaffold50: 205194-209237 Capsella grandiflora
Cagra.0050s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 208738-209237 Capsella grandiflora
Cagra.0050s0047 0.5kb downstream 0.5kb downstream 4044 true Scaffold50: 204694-208737 Capsella grandiflora
Cagra.0050s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 204694-205193 Capsella grandiflora
Cagra.0050s0047 1.0kb upstream 1.0kb upstream 4544 true Scaffold50: 205194-209737 Capsella grandiflora
Cagra.0050s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 208738-209737 Capsella grandiflora
Cagra.0050s0047 1.0kb downstream 1.0kb downstream 4544 true Scaffold50: 204194-208737 Capsella grandiflora
Cagra.0050s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 204194-205193 Capsella grandiflora
Cagra.0050s0047 2.0kb upstream 2.0kb upstream 5544 true Scaffold50: 205194-210737 Capsella grandiflora
Cagra.0050s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 208738-210737 Capsella grandiflora
Cagra.0050s0047 2.0kb downstream 2.0kb downstream 5544 true Scaffold50: 203194-208737 Capsella grandiflora
Cagra.0050s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 203194-205193 Capsella grandiflora
Cagra.0050s0047 5.0kb upstream 5.0kb upstream 8544 true Scaffold50: 205194-213737 Capsella grandiflora
Cagra.0050s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 208738-213737 Capsella grandiflora
Cagra.0050s0047 5.0kb downstream 5.0kb downstream 8544 true Scaffold50: 200194-208737 Capsella grandiflora
Cagra.0050s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 200194-205193 Capsella grandiflora
Cagra.0050s0047 10.0kb upstream 10.0kb upstream 13544 true Scaffold50: 205194-218737 Capsella grandiflora
Cagra.0050s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 208738-218737 Capsella grandiflora
Cagra.0050s0047 10.0kb downstream 10.0kb downstream 13544 true Scaffold50: 195194-208737 Capsella grandiflora
Cagra.0050s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 195194-205193 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361234 5261 Brassicaceae View MSA
123830175 5264 Brassicales-Malvales View MSA
124340868 5266 SBM View MSA
124239599 5268 Malvidae View MSA
124063058 5270 Rosid View MSA
123737339 5271 Pentapetalae View MSA
122785871 5272 Eudicot View MSA
122046448 5273 Angiosperm View MSA
121344588 5274 Embryophyte View MSA
123424324 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain