Gene : Cagra.0050s0063 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31901:SF3 - JASMONIC ACID-AMIDO SYNTHETASE JAR1 Genomic Order:  63
Name:  ? Cagra.0050s0063 Secondary Identifier:  ? PAC:28917108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0063 0.5kb upstream 0.5kb upstream 3682 true Scaffold50: 267436-271117 Capsella grandiflora
Cagra.0050s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 270618-271117 Capsella grandiflora
Cagra.0050s0063 0.5kb downstream 0.5kb downstream 3682 true Scaffold50: 266936-270617 Capsella grandiflora
Cagra.0050s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 266936-267435 Capsella grandiflora
Cagra.0050s0063 1.0kb upstream 1.0kb upstream 4182 true Scaffold50: 267436-271617 Capsella grandiflora
Cagra.0050s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 270618-271617 Capsella grandiflora
Cagra.0050s0063 1.0kb downstream 1.0kb downstream 4182 true Scaffold50: 266436-270617 Capsella grandiflora
Cagra.0050s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 266436-267435 Capsella grandiflora
Cagra.0050s0063 2.0kb upstream 2.0kb upstream 5182 true Scaffold50: 267436-272617 Capsella grandiflora
Cagra.0050s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 270618-272617 Capsella grandiflora
Cagra.0050s0063 2.0kb downstream 2.0kb downstream 5182 true Scaffold50: 265436-270617 Capsella grandiflora
Cagra.0050s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 265436-267435 Capsella grandiflora
Cagra.0050s0063 5.0kb upstream 5.0kb upstream 8182 true Scaffold50: 267436-275617 Capsella grandiflora
Cagra.0050s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 270618-275617 Capsella grandiflora
Cagra.0050s0063 5.0kb downstream 5.0kb downstream 8182 true Scaffold50: 262436-270617 Capsella grandiflora
Cagra.0050s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 262436-267435 Capsella grandiflora
Cagra.0050s0063 10.0kb upstream 10.0kb upstream 13182 true Scaffold50: 267436-280617 Capsella grandiflora
Cagra.0050s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 270618-280617 Capsella grandiflora
Cagra.0050s0063 10.0kb downstream 10.0kb downstream 13182 true Scaffold50: 257436-270617 Capsella grandiflora
Cagra.0050s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 257436-267435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370144 5261 Brassicaceae View MSA
123839817 5264 Brassicales-Malvales View MSA
124351107 5266 SBM View MSA
124245184 5268 Malvidae View MSA
124063080 5270 Rosid View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain