Gene : Cagra.0050s0075 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12416:SF2 - RRNA-PROCESSING PROTEIN FCF1 HOMOLOG Genomic Order:  75
Name:  ? Cagra.0050s0075 Secondary Identifier:  ? PAC:28916973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0075 0.5kb upstream 0.5kb upstream 2288 true Scaffold50: 321097-323384 Capsella grandiflora
Cagra.0050s0075 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 321097-321596 Capsella grandiflora
Cagra.0050s0075 0.5kb downstream 0.5kb downstream 2288 true Scaffold50: 321597-323884 Capsella grandiflora
Cagra.0050s0075 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 323385-323884 Capsella grandiflora
Cagra.0050s0075 1.0kb upstream 1.0kb upstream 2788 true Scaffold50: 320597-323384 Capsella grandiflora
Cagra.0050s0075 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 320597-321596 Capsella grandiflora
Cagra.0050s0075 1.0kb downstream 1.0kb downstream 2788 true Scaffold50: 321597-324384 Capsella grandiflora
Cagra.0050s0075 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 323385-324384 Capsella grandiflora
Cagra.0050s0075 2.0kb upstream 2.0kb upstream 3788 true Scaffold50: 319597-323384 Capsella grandiflora
Cagra.0050s0075 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 319597-321596 Capsella grandiflora
Cagra.0050s0075 2.0kb downstream 2.0kb downstream 3788 true Scaffold50: 321597-325384 Capsella grandiflora
Cagra.0050s0075 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 323385-325384 Capsella grandiflora
Cagra.0050s0075 5.0kb upstream 5.0kb upstream 6788 true Scaffold50: 316597-323384 Capsella grandiflora
Cagra.0050s0075 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 316597-321596 Capsella grandiflora
Cagra.0050s0075 5.0kb downstream 5.0kb downstream 6788 true Scaffold50: 321597-328384 Capsella grandiflora
Cagra.0050s0075 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 323385-328384 Capsella grandiflora
Cagra.0050s0075 10.0kb upstream 10.0kb upstream 11788 true Scaffold50: 311597-323384 Capsella grandiflora
Cagra.0050s0075 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 311597-321596 Capsella grandiflora
Cagra.0050s0075 10.0kb downstream 10.0kb downstream 11788 true Scaffold50: 321597-333384 Capsella grandiflora
Cagra.0050s0075 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 323385-333384 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365032 5261 Brassicaceae View MSA
123829493 5264 Brassicales-Malvales View MSA
124343317 5266 SBM View MSA
124242937 5268 Malvidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain