Gene : Cagra.0050s0080 C. grandiflora v1.1
Defline:  (1 of 26) PF07723//PF08387 - Leucine Rich Repeat (LRR_2) // FBD (FBD) Genomic Order:  80
Name:  ? Cagra.0050s0080 Secondary Identifier:  ? PAC:28916982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0080 0.5kb upstream 0.5kb upstream 1965 true Scaffold50: 335182-337146 Capsella grandiflora
Cagra.0050s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 336647-337146 Capsella grandiflora
Cagra.0050s0080 0.5kb downstream 0.5kb downstream 1965 true Scaffold50: 334682-336646 Capsella grandiflora
Cagra.0050s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 334682-335181 Capsella grandiflora
Cagra.0050s0080 1.0kb upstream 1.0kb upstream 2465 true Scaffold50: 335182-337646 Capsella grandiflora
Cagra.0050s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 336647-337646 Capsella grandiflora
Cagra.0050s0080 1.0kb downstream 1.0kb downstream 2465 true Scaffold50: 334182-336646 Capsella grandiflora
Cagra.0050s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 334182-335181 Capsella grandiflora
Cagra.0050s0080 2.0kb upstream 2.0kb upstream 3465 true Scaffold50: 335182-338646 Capsella grandiflora
Cagra.0050s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 336647-338646 Capsella grandiflora
Cagra.0050s0080 2.0kb downstream 2.0kb downstream 3465 true Scaffold50: 333182-336646 Capsella grandiflora
Cagra.0050s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 333182-335181 Capsella grandiflora
Cagra.0050s0080 5.0kb upstream 5.0kb upstream 6465 true Scaffold50: 335182-341646 Capsella grandiflora
Cagra.0050s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 336647-341646 Capsella grandiflora
Cagra.0050s0080 5.0kb downstream 5.0kb downstream 6465 true Scaffold50: 330182-336646 Capsella grandiflora
Cagra.0050s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 330182-335181 Capsella grandiflora
Cagra.0050s0080 10.0kb upstream 10.0kb upstream 11465 true Scaffold50: 335182-346646 Capsella grandiflora
Cagra.0050s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 336647-346646 Capsella grandiflora
Cagra.0050s0080 10.0kb downstream 10.0kb downstream 11465 true Scaffold50: 325182-336646 Capsella grandiflora
Cagra.0050s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 325182-335181 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381753 5261 Brassicaceae View MSA
123803421 5264 Brassicales-Malvales View MSA
124300533 5266 SBM View MSA
124151699 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain