Gene : Cagra.0050s0092 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14319 - FIVE-SPAN TRANSMEMBRANE PROTEIN M83 Genomic Order:  92
Name:  ? Cagra.0050s0092 Secondary Identifier:  ? PAC:28917007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0092 0.5kb upstream 0.5kb upstream 4765 true Scaffold50: 364586-369350 Capsella grandiflora
Cagra.0050s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 364586-365085 Capsella grandiflora
Cagra.0050s0092 0.5kb downstream 0.5kb downstream 4765 true Scaffold50: 365086-369850 Capsella grandiflora
Cagra.0050s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 369351-369850 Capsella grandiflora
Cagra.0050s0092 1.0kb upstream 1.0kb upstream 5265 true Scaffold50: 364086-369350 Capsella grandiflora
Cagra.0050s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 364086-365085 Capsella grandiflora
Cagra.0050s0092 1.0kb downstream 1.0kb downstream 5265 true Scaffold50: 365086-370350 Capsella grandiflora
Cagra.0050s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 369351-370350 Capsella grandiflora
Cagra.0050s0092 2.0kb upstream 2.0kb upstream 6265 true Scaffold50: 363086-369350 Capsella grandiflora
Cagra.0050s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 363086-365085 Capsella grandiflora
Cagra.0050s0092 2.0kb downstream 2.0kb downstream 6265 true Scaffold50: 365086-371350 Capsella grandiflora
Cagra.0050s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 369351-371350 Capsella grandiflora
Cagra.0050s0092 5.0kb upstream 5.0kb upstream 9265 true Scaffold50: 360086-369350 Capsella grandiflora
Cagra.0050s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 360086-365085 Capsella grandiflora
Cagra.0050s0092 5.0kb downstream 5.0kb downstream 9265 true Scaffold50: 365086-374350 Capsella grandiflora
Cagra.0050s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 369351-374350 Capsella grandiflora
Cagra.0050s0092 10.0kb upstream 10.0kb upstream 14265 true Scaffold50: 355086-369350 Capsella grandiflora
Cagra.0050s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 355086-365085 Capsella grandiflora
Cagra.0050s0092 10.0kb downstream 10.0kb downstream 14265 true Scaffold50: 365086-379350 Capsella grandiflora
Cagra.0050s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 369351-379350 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375391 5261 Brassicaceae View MSA
123835012 5264 Brassicales-Malvales View MSA
124339458 5266 SBM View MSA
124244648 5268 Malvidae View MSA
124063735 5270 Rosid View MSA
123746446 5271 Pentapetalae View MSA
122797825 5272 Eudicot View MSA
122045638 5273 Angiosperm View MSA
121347516 5274 Embryophyte View MSA
123380561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain