Gene : Cagra.0050s0096 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Genomic Order:  96
Name:  ? Cagra.0050s0096 Secondary Identifier:  ? PAC:28917076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0096 0.5kb upstream 0.5kb upstream 9716 true Scaffold50: 378816-388531 Capsella grandiflora
Cagra.0050s0096 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 388032-388531 Capsella grandiflora
Cagra.0050s0096 0.5kb downstream 0.5kb downstream 9716 true Scaffold50: 378316-388031 Capsella grandiflora
Cagra.0050s0096 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 378316-378815 Capsella grandiflora
Cagra.0050s0096 1.0kb upstream 1.0kb upstream 10216 true Scaffold50: 378816-389031 Capsella grandiflora
Cagra.0050s0096 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 388032-389031 Capsella grandiflora
Cagra.0050s0096 1.0kb downstream 1.0kb downstream 10216 true Scaffold50: 377816-388031 Capsella grandiflora
Cagra.0050s0096 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 377816-378815 Capsella grandiflora
Cagra.0050s0096 2.0kb upstream 2.0kb upstream 11216 true Scaffold50: 378816-390031 Capsella grandiflora
Cagra.0050s0096 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 388032-390031 Capsella grandiflora
Cagra.0050s0096 2.0kb downstream 2.0kb downstream 11216 true Scaffold50: 376816-388031 Capsella grandiflora
Cagra.0050s0096 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 376816-378815 Capsella grandiflora
Cagra.0050s0096 5.0kb upstream 5.0kb upstream 14216 true Scaffold50: 378816-393031 Capsella grandiflora
Cagra.0050s0096 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 388032-393031 Capsella grandiflora
Cagra.0050s0096 5.0kb downstream 5.0kb downstream 14216 true Scaffold50: 373816-388031 Capsella grandiflora
Cagra.0050s0096 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 373816-378815 Capsella grandiflora
Cagra.0050s0096 10.0kb upstream 10.0kb upstream 19216 true Scaffold50: 378816-398031 Capsella grandiflora
Cagra.0050s0096 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 388032-398031 Capsella grandiflora
Cagra.0050s0096 10.0kb downstream 10.0kb downstream 19216 true Scaffold50: 368816-388031 Capsella grandiflora
Cagra.0050s0096 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 368816-378815 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377449 5261 Brassicaceae View MSA
123839207 5264 Brassicales-Malvales View MSA
124350968 5266 SBM View MSA
124246961 5268 Malvidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain