Gene : Cagra.0050s0106 C. grandiflora v1.1
Defline:  (1 of 4) PTHR21726:SF30 - PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  106
Name:  ? Cagra.0050s0106 Secondary Identifier:  ? PAC:28917075
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0106 0.5kb upstream 0.5kb upstream 4052 true Scaffold50: 419278-423329 Capsella grandiflora
Cagra.0050s0106 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 419278-419777 Capsella grandiflora
Cagra.0050s0106 0.5kb downstream 0.5kb downstream 4052 true Scaffold50: 419778-423829 Capsella grandiflora
Cagra.0050s0106 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 423330-423829 Capsella grandiflora
Cagra.0050s0106 1.0kb upstream 1.0kb upstream 4552 true Scaffold50: 418778-423329 Capsella grandiflora
Cagra.0050s0106 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 418778-419777 Capsella grandiflora
Cagra.0050s0106 1.0kb downstream 1.0kb downstream 4552 true Scaffold50: 419778-424329 Capsella grandiflora
Cagra.0050s0106 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 423330-424329 Capsella grandiflora
Cagra.0050s0106 2.0kb upstream 2.0kb upstream 5552 true Scaffold50: 417778-423329 Capsella grandiflora
Cagra.0050s0106 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 417778-419777 Capsella grandiflora
Cagra.0050s0106 2.0kb downstream 2.0kb downstream 5552 true Scaffold50: 419778-425329 Capsella grandiflora
Cagra.0050s0106 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 423330-425329 Capsella grandiflora
Cagra.0050s0106 5.0kb upstream 5.0kb upstream 8552 true Scaffold50: 414778-423329 Capsella grandiflora
Cagra.0050s0106 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 414778-419777 Capsella grandiflora
Cagra.0050s0106 5.0kb downstream 5.0kb downstream 8552 true Scaffold50: 419778-428329 Capsella grandiflora
Cagra.0050s0106 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 423330-428329 Capsella grandiflora
Cagra.0050s0106 10.0kb upstream 10.0kb upstream 13552 true Scaffold50: 409778-423329 Capsella grandiflora
Cagra.0050s0106 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 409778-419777 Capsella grandiflora
Cagra.0050s0106 10.0kb downstream 10.0kb downstream 13552 true Scaffold50: 419778-433329 Capsella grandiflora
Cagra.0050s0106 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 423330-433329 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376475 5261 Brassicaceae View MSA
123801264 5264 Brassicales-Malvales View MSA
124298587 5266 SBM View MSA
124150196 5268 Malvidae View MSA
123875856 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain