Gene : Cagra.0084s0064 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  64
Name:  ? Cagra.0084s0064 Secondary Identifier:  ? PAC:28895384
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0064 0.5kb upstream 0.5kb upstream 5875 true Scaffold84: 252753-258627 Capsella grandiflora
Cagra.0084s0064 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 258128-258627 Capsella grandiflora
Cagra.0084s0064 0.5kb downstream 0.5kb downstream 5875 true Scaffold84: 252253-258127 Capsella grandiflora
Cagra.0084s0064 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 252253-252752 Capsella grandiflora
Cagra.0084s0064 1.0kb upstream 1.0kb upstream 6375 true Scaffold84: 252753-259127 Capsella grandiflora
Cagra.0084s0064 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 258128-259127 Capsella grandiflora
Cagra.0084s0064 1.0kb downstream 1.0kb downstream 6375 true Scaffold84: 251753-258127 Capsella grandiflora
Cagra.0084s0064 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 251753-252752 Capsella grandiflora
Cagra.0084s0064 2.0kb upstream 2.0kb upstream 7375 true Scaffold84: 252753-260127 Capsella grandiflora
Cagra.0084s0064 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 258128-260127 Capsella grandiflora
Cagra.0084s0064 2.0kb downstream 2.0kb downstream 7375 true Scaffold84: 250753-258127 Capsella grandiflora
Cagra.0084s0064 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 250753-252752 Capsella grandiflora
Cagra.0084s0064 5.0kb upstream 5.0kb upstream 10375 true Scaffold84: 252753-263127 Capsella grandiflora
Cagra.0084s0064 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 258128-263127 Capsella grandiflora
Cagra.0084s0064 5.0kb downstream 5.0kb downstream 10375 true Scaffold84: 247753-258127 Capsella grandiflora
Cagra.0084s0064 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 247753-252752 Capsella grandiflora
Cagra.0084s0064 10.0kb upstream 10.0kb upstream 15375 true Scaffold84: 252753-268127 Capsella grandiflora
Cagra.0084s0064 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 258128-268127 Capsella grandiflora
Cagra.0084s0064 10.0kb downstream 10.0kb downstream 15375 true Scaffold84: 242753-258127 Capsella grandiflora
Cagra.0084s0064 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 242753-252752 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376430 5261 Brassicaceae View MSA
123833688 5264 Brassicales-Malvales View MSA
124321889 5266 SBM View MSA
124253542 5268 Malvidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain