Gene : Cagra.0084s0092 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14136:SF11 - THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  92
Name:  ? Cagra.0084s0092 Secondary Identifier:  ? PAC:28895334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0092 0.5kb upstream 0.5kb upstream 1939 true Scaffold84: 407365-409303 Capsella grandiflora
Cagra.0084s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 408804-409303 Capsella grandiflora
Cagra.0084s0092 0.5kb downstream 0.5kb downstream 1939 true Scaffold84: 406865-408803 Capsella grandiflora
Cagra.0084s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 406865-407364 Capsella grandiflora
Cagra.0084s0092 1.0kb upstream 1.0kb upstream 2439 true Scaffold84: 407365-409803 Capsella grandiflora
Cagra.0084s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 408804-409803 Capsella grandiflora
Cagra.0084s0092 1.0kb downstream 1.0kb downstream 2439 true Scaffold84: 406365-408803 Capsella grandiflora
Cagra.0084s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 406365-407364 Capsella grandiflora
Cagra.0084s0092 2.0kb upstream 2.0kb upstream 3439 true Scaffold84: 407365-410803 Capsella grandiflora
Cagra.0084s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 408804-410803 Capsella grandiflora
Cagra.0084s0092 2.0kb downstream 2.0kb downstream 3439 true Scaffold84: 405365-408803 Capsella grandiflora
Cagra.0084s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 405365-407364 Capsella grandiflora
Cagra.0084s0092 5.0kb upstream 5.0kb upstream 6439 true Scaffold84: 407365-413803 Capsella grandiflora
Cagra.0084s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 408804-413803 Capsella grandiflora
Cagra.0084s0092 5.0kb downstream 5.0kb downstream 6439 true Scaffold84: 402365-408803 Capsella grandiflora
Cagra.0084s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 402365-407364 Capsella grandiflora
Cagra.0084s0092 10.0kb upstream 10.0kb upstream 8769 true Scaffold84: 407365-416133 Capsella grandiflora
Cagra.0084s0092 10.0kb upstream 10.0kb upstream 7330 false Scaffold84: 408804-416133 Capsella grandiflora
Cagra.0084s0092 10.0kb downstream 10.0kb downstream 11439 true Scaffold84: 397365-408803 Capsella grandiflora
Cagra.0084s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 397365-407364 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378923 5261 Brassicaceae View MSA
123837036 5264 Brassicales-Malvales View MSA
124346992 5266 SBM View MSA
124245429 5268 Malvidae View MSA
124066927 5270 Rosid View MSA
123751077 5271 Pentapetalae View MSA
122794954 5272 Eudicot View MSA
122044610 5273 Angiosperm View MSA
121348286 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain