Gene : Cagra.0050s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR36027:SF1 - ASYNAPTIC 3 Genomic Order:  1
Name:  ? Cagra.0050s0001 Secondary Identifier:  ? PAC:28917051
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0001 0.5kb upstream 0.5kb upstream 5240 true Scaffold50: 4136-9375 Capsella grandiflora
Cagra.0050s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 4136-4635 Capsella grandiflora
Cagra.0050s0001 0.5kb downstream 0.5kb downstream 5240 true Scaffold50: 4636-9875 Capsella grandiflora
Cagra.0050s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 9376-9875 Capsella grandiflora
Cagra.0050s0001 1.0kb upstream 1.0kb upstream 5740 true Scaffold50: 3636-9375 Capsella grandiflora
Cagra.0050s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 3636-4635 Capsella grandiflora
Cagra.0050s0001 1.0kb downstream 1.0kb downstream 5740 true Scaffold50: 4636-10375 Capsella grandiflora
Cagra.0050s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 9376-10375 Capsella grandiflora
Cagra.0050s0001 2.0kb upstream 2.0kb upstream 6740 true Scaffold50: 2636-9375 Capsella grandiflora
Cagra.0050s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 2636-4635 Capsella grandiflora
Cagra.0050s0001 2.0kb downstream 2.0kb downstream 6740 true Scaffold50: 4636-11375 Capsella grandiflora
Cagra.0050s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 9376-11375 Capsella grandiflora
Cagra.0050s0001 5.0kb upstream 5.0kb upstream 9375 true Scaffold50: 1-9375 Capsella grandiflora
Cagra.0050s0001 5.0kb upstream 5.0kb upstream 4635 false Scaffold50: 1-4635 Capsella grandiflora
Cagra.0050s0001 5.0kb downstream 5.0kb downstream 9740 true Scaffold50: 4636-14375 Capsella grandiflora
Cagra.0050s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 9376-14375 Capsella grandiflora
Cagra.0050s0001 10.0kb upstream 10.0kb upstream 9375 true Scaffold50: 1-9375 Capsella grandiflora
Cagra.0050s0001 10.0kb upstream 10.0kb upstream 4635 false Scaffold50: 1-4635 Capsella grandiflora
Cagra.0050s0001 10.0kb downstream 10.0kb downstream 14740 true Scaffold50: 4636-19375 Capsella grandiflora
Cagra.0050s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 9376-19375 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026354 5273 Angiosperm View MSA
122368045 5261 Brassicaceae View MSA
123832234 5264 Brassicales-Malvales View MSA
124344085 5266 SBM View MSA
124252882 5268 Malvidae View MSA
124064742 5270 Rosid View MSA
123736422 5271 Pentapetalae View MSA
122789139 5272 Eudicot View MSA
121296292 5274 Embryophyte View MSA
123334482 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain