Gene : Cagra.0050s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11562:SF54 - METAL TOLERANCE PROTEIN B Genomic Order:  20
Name:  ? Cagra.0050s0020 Secondary Identifier:  ? PAC:28916971
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0020 0.5kb upstream 0.5kb upstream 2701 true Scaffold50: 71066-73766 Capsella grandiflora
Cagra.0050s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 73267-73766 Capsella grandiflora
Cagra.0050s0020 0.5kb downstream 0.5kb downstream 2701 true Scaffold50: 70566-73266 Capsella grandiflora
Cagra.0050s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 70566-71065 Capsella grandiflora
Cagra.0050s0020 1.0kb upstream 1.0kb upstream 3201 true Scaffold50: 71066-74266 Capsella grandiflora
Cagra.0050s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 73267-74266 Capsella grandiflora
Cagra.0050s0020 1.0kb downstream 1.0kb downstream 3201 true Scaffold50: 70066-73266 Capsella grandiflora
Cagra.0050s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 70066-71065 Capsella grandiflora
Cagra.0050s0020 2.0kb upstream 2.0kb upstream 4201 true Scaffold50: 71066-75266 Capsella grandiflora
Cagra.0050s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 73267-75266 Capsella grandiflora
Cagra.0050s0020 2.0kb downstream 2.0kb downstream 4201 true Scaffold50: 69066-73266 Capsella grandiflora
Cagra.0050s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 69066-71065 Capsella grandiflora
Cagra.0050s0020 5.0kb upstream 5.0kb upstream 7201 true Scaffold50: 71066-78266 Capsella grandiflora
Cagra.0050s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 73267-78266 Capsella grandiflora
Cagra.0050s0020 5.0kb downstream 5.0kb downstream 7201 true Scaffold50: 66066-73266 Capsella grandiflora
Cagra.0050s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 66066-71065 Capsella grandiflora
Cagra.0050s0020 10.0kb upstream 10.0kb upstream 12201 true Scaffold50: 71066-83266 Capsella grandiflora
Cagra.0050s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 73267-83266 Capsella grandiflora
Cagra.0050s0020 10.0kb downstream 10.0kb downstream 12201 true Scaffold50: 61066-73266 Capsella grandiflora
Cagra.0050s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 61066-71065 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360722 5261 Brassicaceae View MSA
123828196 5264 Brassicales-Malvales View MSA
124340010 5266 SBM View MSA
124242751 5268 Malvidae View MSA
124072009 5270 Rosid View MSA
123747462 5271 Pentapetalae View MSA
122791570 5272 Eudicot View MSA
122042960 5273 Angiosperm View MSA
121349526 5274 Embryophyte View MSA
123427530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain