Gene : Cagra.0050s0029 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23177:SF24 - RHO GTPASE-ACTIVATING PROTEIN 3-RELATED Genomic Order:  29
Name:  ? Cagra.0050s0029 Secondary Identifier:  ? PAC:28916962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0029 0.5kb upstream 0.5kb upstream 3373 true Scaffold50: 107405-110777 Capsella grandiflora
Cagra.0050s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 110278-110777 Capsella grandiflora
Cagra.0050s0029 0.5kb downstream 0.5kb downstream 3373 true Scaffold50: 106905-110277 Capsella grandiflora
Cagra.0050s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 106905-107404 Capsella grandiflora
Cagra.0050s0029 1.0kb upstream 1.0kb upstream 3873 true Scaffold50: 107405-111277 Capsella grandiflora
Cagra.0050s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 110278-111277 Capsella grandiflora
Cagra.0050s0029 1.0kb downstream 1.0kb downstream 3873 true Scaffold50: 106405-110277 Capsella grandiflora
Cagra.0050s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 106405-107404 Capsella grandiflora
Cagra.0050s0029 2.0kb upstream 2.0kb upstream 4873 true Scaffold50: 107405-112277 Capsella grandiflora
Cagra.0050s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 110278-112277 Capsella grandiflora
Cagra.0050s0029 2.0kb downstream 2.0kb downstream 4873 true Scaffold50: 105405-110277 Capsella grandiflora
Cagra.0050s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 105405-107404 Capsella grandiflora
Cagra.0050s0029 5.0kb upstream 5.0kb upstream 7873 true Scaffold50: 107405-115277 Capsella grandiflora
Cagra.0050s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 110278-115277 Capsella grandiflora
Cagra.0050s0029 5.0kb downstream 5.0kb downstream 7873 true Scaffold50: 102405-110277 Capsella grandiflora
Cagra.0050s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 102405-107404 Capsella grandiflora
Cagra.0050s0029 10.0kb upstream 10.0kb upstream 12873 true Scaffold50: 107405-120277 Capsella grandiflora
Cagra.0050s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 110278-120277 Capsella grandiflora
Cagra.0050s0029 10.0kb downstream 10.0kb downstream 12873 true Scaffold50: 97405-110277 Capsella grandiflora
Cagra.0050s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 97405-107404 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367670 5261 Brassicaceae View MSA
123831672 5264 Brassicales-Malvales View MSA
124345448 5266 SBM View MSA
124251543 5268 Malvidae View MSA
124066975 5270 Rosid View MSA
123741878 5271 Pentapetalae View MSA
122795435 5272 Eudicot View MSA
122041800 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain