Gene : Cagra.0026s0044 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12570:SF20 - GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F14O13 Genomic Order:  44
Name:  ? Cagra.0026s0044 Secondary Identifier:  ? PAC:28919769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0026s0044 0.5kb upstream 0.5kb upstream 2588 true Scaffold26: 170490-173077 Capsella grandiflora
Cagra.0026s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold26: 172578-173077 Capsella grandiflora
Cagra.0026s0044 0.5kb downstream 0.5kb downstream 2588 true Scaffold26: 169990-172577 Capsella grandiflora
Cagra.0026s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold26: 169990-170489 Capsella grandiflora
Cagra.0026s0044 1.0kb upstream 1.0kb upstream 3088 true Scaffold26: 170490-173577 Capsella grandiflora
Cagra.0026s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold26: 172578-173577 Capsella grandiflora
Cagra.0026s0044 1.0kb downstream 1.0kb downstream 3088 true Scaffold26: 169490-172577 Capsella grandiflora
Cagra.0026s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold26: 169490-170489 Capsella grandiflora
Cagra.0026s0044 2.0kb upstream 2.0kb upstream 4088 true Scaffold26: 170490-174577 Capsella grandiflora
Cagra.0026s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold26: 172578-174577 Capsella grandiflora
Cagra.0026s0044 2.0kb downstream 2.0kb downstream 4088 true Scaffold26: 168490-172577 Capsella grandiflora
Cagra.0026s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold26: 168490-170489 Capsella grandiflora
Cagra.0026s0044 5.0kb upstream 5.0kb upstream 7088 true Scaffold26: 170490-177577 Capsella grandiflora
Cagra.0026s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold26: 172578-177577 Capsella grandiflora
Cagra.0026s0044 5.0kb downstream 5.0kb downstream 7088 true Scaffold26: 165490-172577 Capsella grandiflora
Cagra.0026s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold26: 165490-170489 Capsella grandiflora
Cagra.0026s0044 10.0kb upstream 10.0kb upstream 12088 true Scaffold26: 170490-182577 Capsella grandiflora
Cagra.0026s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold26: 172578-182577 Capsella grandiflora
Cagra.0026s0044 10.0kb downstream 10.0kb downstream 12088 true Scaffold26: 160490-172577 Capsella grandiflora
Cagra.0026s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold26: 160490-170489 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376670 5261 Brassicaceae View MSA
123838674 5264 Brassicales-Malvales View MSA
124339897 5266 SBM View MSA
124248760 5268 Malvidae View MSA
124075521 5270 Rosid View MSA
123745073 5271 Pentapetalae View MSA
122789394 5272 Eudicot View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain