Gene : Cagra.0027s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23070:SF26 - AAA-TYPE ATPASE LIKE PROTEIN Genomic Order:  3
Name:  ? Cagra.0027s0003 Secondary Identifier:  ? PAC:28895749
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0027s0003 0.5kb upstream 0.5kb upstream 2284 true Scaffold27: 3935-6218 Capsella grandiflora
Cagra.0027s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold27: 3935-4434 Capsella grandiflora
Cagra.0027s0003 0.5kb downstream 0.5kb downstream 2284 true Scaffold27: 4435-6718 Capsella grandiflora
Cagra.0027s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold27: 6219-6718 Capsella grandiflora
Cagra.0027s0003 1.0kb upstream 1.0kb upstream 2784 true Scaffold27: 3435-6218 Capsella grandiflora
Cagra.0027s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold27: 3435-4434 Capsella grandiflora
Cagra.0027s0003 1.0kb downstream 1.0kb downstream 2784 true Scaffold27: 4435-7218 Capsella grandiflora
Cagra.0027s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold27: 6219-7218 Capsella grandiflora
Cagra.0027s0003 2.0kb upstream 2.0kb upstream 3784 true Scaffold27: 2435-6218 Capsella grandiflora
Cagra.0027s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold27: 2435-4434 Capsella grandiflora
Cagra.0027s0003 2.0kb downstream 2.0kb downstream 3784 true Scaffold27: 4435-8218 Capsella grandiflora
Cagra.0027s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold27: 6219-8218 Capsella grandiflora
Cagra.0027s0003 5.0kb upstream 5.0kb upstream 6218 true Scaffold27: 1-6218 Capsella grandiflora
Cagra.0027s0003 5.0kb upstream 5.0kb upstream 4434 false Scaffold27: 1-4434 Capsella grandiflora
Cagra.0027s0003 5.0kb downstream 5.0kb downstream 6784 true Scaffold27: 4435-11218 Capsella grandiflora
Cagra.0027s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold27: 6219-11218 Capsella grandiflora
Cagra.0027s0003 10.0kb upstream 10.0kb upstream 6218 true Scaffold27: 1-6218 Capsella grandiflora
Cagra.0027s0003 10.0kb upstream 10.0kb upstream 4434 false Scaffold27: 1-4434 Capsella grandiflora
Cagra.0027s0003 10.0kb downstream 10.0kb downstream 11784 true Scaffold27: 4435-16218 Capsella grandiflora
Cagra.0027s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold27: 6219-16218 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368029 5261 Brassicaceae View MSA
123832854 5264 Brassicales-Malvales View MSA
124339168 5266 SBM View MSA
124240320 5268 Malvidae View MSA
124074026 5270 Rosid View MSA
123751190 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain