Gene : Cagra.0027s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Genomic Order:  15
Name:  ? Cagra.0027s0015 Secondary Identifier:  ? PAC:28895757
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0027s0015 0.5kb upstream 0.5kb upstream 4033 true Scaffold27: 43594-47626 Capsella grandiflora
Cagra.0027s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold27: 47127-47626 Capsella grandiflora
Cagra.0027s0015 0.5kb downstream 0.5kb downstream 4033 true Scaffold27: 43094-47126 Capsella grandiflora
Cagra.0027s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold27: 43094-43593 Capsella grandiflora
Cagra.0027s0015 1.0kb upstream 1.0kb upstream 4533 true Scaffold27: 43594-48126 Capsella grandiflora
Cagra.0027s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold27: 47127-48126 Capsella grandiflora
Cagra.0027s0015 1.0kb downstream 1.0kb downstream 4533 true Scaffold27: 42594-47126 Capsella grandiflora
Cagra.0027s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold27: 42594-43593 Capsella grandiflora
Cagra.0027s0015 2.0kb upstream 2.0kb upstream 5214 true Scaffold27: 43594-48807 Capsella grandiflora
Cagra.0027s0015 2.0kb upstream 2.0kb upstream 1681 false Scaffold27: 47127-48807 Capsella grandiflora
Cagra.0027s0015 2.0kb downstream 2.0kb downstream 5533 true Scaffold27: 41594-47126 Capsella grandiflora
Cagra.0027s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold27: 41594-43593 Capsella grandiflora
Cagra.0027s0015 5.0kb upstream 5.0kb upstream 5214 true Scaffold27: 43594-48807 Capsella grandiflora
Cagra.0027s0015 5.0kb upstream 5.0kb upstream 1681 false Scaffold27: 47127-48807 Capsella grandiflora
Cagra.0027s0015 5.0kb downstream 5.0kb downstream 8533 true Scaffold27: 38594-47126 Capsella grandiflora
Cagra.0027s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold27: 38594-43593 Capsella grandiflora
Cagra.0027s0015 10.0kb upstream 10.0kb upstream 5214 true Scaffold27: 43594-48807 Capsella grandiflora
Cagra.0027s0015 10.0kb upstream 10.0kb upstream 1681 false Scaffold27: 47127-48807 Capsella grandiflora
Cagra.0027s0015 10.0kb downstream 10.0kb downstream 13533 true Scaffold27: 33594-47126 Capsella grandiflora
Cagra.0027s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold27: 33594-43593 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365616 5261 Brassicaceae View MSA
123798997 5264 Brassicales-Malvales View MSA
124296565 5266 SBM View MSA
124148678 5268 Malvidae View MSA
123874629 5270 Rosid View MSA
123753023 5271 Pentapetalae View MSA
122797063 5272 Eudicot View MSA
122044287 5273 Angiosperm View MSA
121348598 5274 Embryophyte View MSA
123380932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain