Gene : Cagra.0084s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12064//PTHR12064:SF36 - ANCIENT CONSERVED DOMAIN PROTEIN-RELATED Genomic Order:  23
Name:  ? Cagra.0084s0023 Secondary Identifier:  ? PAC:28895389
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0023 0.5kb upstream 0.5kb upstream 4795 true Scaffold84: 80668-85462 Capsella grandiflora
Cagra.0084s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 84963-85462 Capsella grandiflora
Cagra.0084s0023 0.5kb downstream 0.5kb downstream 4795 true Scaffold84: 80168-84962 Capsella grandiflora
Cagra.0084s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 80168-80667 Capsella grandiflora
Cagra.0084s0023 1.0kb upstream 1.0kb upstream 5295 true Scaffold84: 80668-85962 Capsella grandiflora
Cagra.0084s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 84963-85962 Capsella grandiflora
Cagra.0084s0023 1.0kb downstream 1.0kb downstream 5295 true Scaffold84: 79668-84962 Capsella grandiflora
Cagra.0084s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 79668-80667 Capsella grandiflora
Cagra.0084s0023 2.0kb upstream 2.0kb upstream 6295 true Scaffold84: 80668-86962 Capsella grandiflora
Cagra.0084s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 84963-86962 Capsella grandiflora
Cagra.0084s0023 2.0kb downstream 2.0kb downstream 6295 true Scaffold84: 78668-84962 Capsella grandiflora
Cagra.0084s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 78668-80667 Capsella grandiflora
Cagra.0084s0023 5.0kb upstream 5.0kb upstream 9295 true Scaffold84: 80668-89962 Capsella grandiflora
Cagra.0084s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 84963-89962 Capsella grandiflora
Cagra.0084s0023 5.0kb downstream 5.0kb downstream 9295 true Scaffold84: 75668-84962 Capsella grandiflora
Cagra.0084s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 75668-80667 Capsella grandiflora
Cagra.0084s0023 10.0kb upstream 10.0kb upstream 14295 true Scaffold84: 80668-94962 Capsella grandiflora
Cagra.0084s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 84963-94962 Capsella grandiflora
Cagra.0084s0023 10.0kb downstream 10.0kb downstream 14295 true Scaffold84: 70668-84962 Capsella grandiflora
Cagra.0084s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 70668-80667 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372246 5261 Brassicaceae View MSA
123837638 5264 Brassicales-Malvales View MSA
124342723 5266 SBM View MSA
124249676 5268 Malvidae View MSA
124067520 5270 Rosid View MSA
123745826 5271 Pentapetalae View MSA
122787800 5272 Eudicot View MSA
122046250 5273 Angiosperm View MSA
121348237 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain