Gene : Cagra.0084s0035 C. grandiflora v1.1
Defline:  (1 of 2) PTHR34682:SF2 - DNA BINDING PROTEIN Genomic Order:  35
Name:  ? Cagra.0084s0035 Secondary Identifier:  ? PAC:28895402
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0035 0.5kb upstream 0.5kb upstream 3060 true Scaffold84: 147683-150742 Capsella grandiflora
Cagra.0084s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 150243-150742 Capsella grandiflora
Cagra.0084s0035 0.5kb downstream 0.5kb downstream 3060 true Scaffold84: 147183-150242 Capsella grandiflora
Cagra.0084s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 147183-147682 Capsella grandiflora
Cagra.0084s0035 1.0kb upstream 1.0kb upstream 3560 true Scaffold84: 147683-151242 Capsella grandiflora
Cagra.0084s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 150243-151242 Capsella grandiflora
Cagra.0084s0035 1.0kb downstream 1.0kb downstream 3560 true Scaffold84: 146683-150242 Capsella grandiflora
Cagra.0084s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 146683-147682 Capsella grandiflora
Cagra.0084s0035 2.0kb upstream 2.0kb upstream 4560 true Scaffold84: 147683-152242 Capsella grandiflora
Cagra.0084s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 150243-152242 Capsella grandiflora
Cagra.0084s0035 2.0kb downstream 2.0kb downstream 4560 true Scaffold84: 145683-150242 Capsella grandiflora
Cagra.0084s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 145683-147682 Capsella grandiflora
Cagra.0084s0035 5.0kb upstream 5.0kb upstream 7560 true Scaffold84: 147683-155242 Capsella grandiflora
Cagra.0084s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 150243-155242 Capsella grandiflora
Cagra.0084s0035 5.0kb downstream 5.0kb downstream 7560 true Scaffold84: 142683-150242 Capsella grandiflora
Cagra.0084s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 142683-147682 Capsella grandiflora
Cagra.0084s0035 10.0kb upstream 10.0kb upstream 12560 true Scaffold84: 147683-160242 Capsella grandiflora
Cagra.0084s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 150243-160242 Capsella grandiflora
Cagra.0084s0035 10.0kb downstream 10.0kb downstream 12560 true Scaffold84: 137683-150242 Capsella grandiflora
Cagra.0084s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 137683-147682 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361503 5261 Brassicaceae View MSA
123833681 5264 Brassicales-Malvales View MSA
124321888 5266 SBM View MSA
124245786 5268 Malvidae View MSA
124060982 5270 Rosid View MSA
123743810 5271 Pentapetalae View MSA
122794319 5272 Eudicot View MSA
122045641 5273 Angiosperm View MSA
121350221 5274 Embryophyte View MSA
123381629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain