Gene : Cagra.0084s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12653 - NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT Genomic Order:  28
Name:  ? Cagra.0084s0028 Secondary Identifier:  ? PAC:28895342
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0028 0.5kb upstream 0.5kb upstream 1940 true Scaffold84: 104917-106856 Capsella grandiflora
Cagra.0084s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 104917-105416 Capsella grandiflora
Cagra.0084s0028 0.5kb downstream 0.5kb downstream 1940 true Scaffold84: 105417-107356 Capsella grandiflora
Cagra.0084s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 106857-107356 Capsella grandiflora
Cagra.0084s0028 1.0kb upstream 1.0kb upstream 2440 true Scaffold84: 104417-106856 Capsella grandiflora
Cagra.0084s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 104417-105416 Capsella grandiflora
Cagra.0084s0028 1.0kb downstream 1.0kb downstream 2440 true Scaffold84: 105417-107856 Capsella grandiflora
Cagra.0084s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 106857-107856 Capsella grandiflora
Cagra.0084s0028 2.0kb upstream 2.0kb upstream 3440 true Scaffold84: 103417-106856 Capsella grandiflora
Cagra.0084s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 103417-105416 Capsella grandiflora
Cagra.0084s0028 2.0kb downstream 2.0kb downstream 3440 true Scaffold84: 105417-108856 Capsella grandiflora
Cagra.0084s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 106857-108856 Capsella grandiflora
Cagra.0084s0028 5.0kb upstream 5.0kb upstream 6440 true Scaffold84: 100417-106856 Capsella grandiflora
Cagra.0084s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 100417-105416 Capsella grandiflora
Cagra.0084s0028 5.0kb downstream 5.0kb downstream 6440 true Scaffold84: 105417-111856 Capsella grandiflora
Cagra.0084s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 106857-111856 Capsella grandiflora
Cagra.0084s0028 10.0kb upstream 10.0kb upstream 11440 true Scaffold84: 95417-106856 Capsella grandiflora
Cagra.0084s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 95417-105416 Capsella grandiflora
Cagra.0084s0028 10.0kb downstream 10.0kb downstream 11440 true Scaffold84: 105417-116856 Capsella grandiflora
Cagra.0084s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 106857-116856 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378608 5261 Brassicaceae View MSA
123838702 5264 Brassicales-Malvales View MSA
124341816 5266 SBM View MSA
124240898 5268 Malvidae View MSA
124062156 5270 Rosid View MSA
123746684 5271 Pentapetalae View MSA
122793843 5272 Eudicot View MSA
122046813 5273 Angiosperm View MSA
121348614 5274 Embryophyte View MSA
123425136 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain