Gene : Cagra.0084s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC Genomic Order:  43
Name:  ? Cagra.0084s0043 Secondary Identifier:  ? PAC:28895364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0043 0.5kb upstream 0.5kb upstream 2105 true Scaffold84: 181001-183105 Capsella grandiflora
Cagra.0084s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 181001-181500 Capsella grandiflora
Cagra.0084s0043 0.5kb downstream 0.5kb downstream 2105 true Scaffold84: 181501-183605 Capsella grandiflora
Cagra.0084s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 183106-183605 Capsella grandiflora
Cagra.0084s0043 1.0kb upstream 1.0kb upstream 2605 true Scaffold84: 180501-183105 Capsella grandiflora
Cagra.0084s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 180501-181500 Capsella grandiflora
Cagra.0084s0043 1.0kb downstream 1.0kb downstream 2605 true Scaffold84: 181501-184105 Capsella grandiflora
Cagra.0084s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 183106-184105 Capsella grandiflora
Cagra.0084s0043 2.0kb upstream 2.0kb upstream 3605 true Scaffold84: 179501-183105 Capsella grandiflora
Cagra.0084s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 179501-181500 Capsella grandiflora
Cagra.0084s0043 2.0kb downstream 2.0kb downstream 3605 true Scaffold84: 181501-185105 Capsella grandiflora
Cagra.0084s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 183106-185105 Capsella grandiflora
Cagra.0084s0043 5.0kb upstream 5.0kb upstream 6605 true Scaffold84: 176501-183105 Capsella grandiflora
Cagra.0084s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 176501-181500 Capsella grandiflora
Cagra.0084s0043 5.0kb downstream 5.0kb downstream 6605 true Scaffold84: 181501-188105 Capsella grandiflora
Cagra.0084s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 183106-188105 Capsella grandiflora
Cagra.0084s0043 10.0kb upstream 10.0kb upstream 11605 true Scaffold84: 171501-183105 Capsella grandiflora
Cagra.0084s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 171501-181500 Capsella grandiflora
Cagra.0084s0043 10.0kb downstream 10.0kb downstream 11605 true Scaffold84: 181501-193105 Capsella grandiflora
Cagra.0084s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 183106-193105 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368821 5261 Brassicaceae View MSA
123828933 5264 Brassicales-Malvales View MSA
124341861 5266 SBM View MSA
124241076 5268 Malvidae View MSA
124066253 5270 Rosid View MSA
123749452 5271 Pentapetalae View MSA
122788666 5272 Eudicot View MSA
122051168 5273 Angiosperm View MSA
121346154 5274 Embryophyte View MSA
123424497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain