Gene : Cagra.0084s0051 C. grandiflora v1.1
Defline:  (1 of 1) PF09341 - Transcription factor Pcc1 (Pcc1) Genomic Order:  51
Name:  ? Cagra.0084s0051 Secondary Identifier:  ? PAC:28895349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0051 0.5kb upstream 0.5kb upstream 1661 true Scaffold84: 201709-203369 Capsella grandiflora
Cagra.0084s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 202870-203369 Capsella grandiflora
Cagra.0084s0051 0.5kb downstream 0.5kb downstream 1661 true Scaffold84: 201209-202869 Capsella grandiflora
Cagra.0084s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 201209-201708 Capsella grandiflora
Cagra.0084s0051 1.0kb upstream 1.0kb upstream 2161 true Scaffold84: 201709-203869 Capsella grandiflora
Cagra.0084s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 202870-203869 Capsella grandiflora
Cagra.0084s0051 1.0kb downstream 1.0kb downstream 2161 true Scaffold84: 200709-202869 Capsella grandiflora
Cagra.0084s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 200709-201708 Capsella grandiflora
Cagra.0084s0051 2.0kb upstream 2.0kb upstream 3161 true Scaffold84: 201709-204869 Capsella grandiflora
Cagra.0084s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 202870-204869 Capsella grandiflora
Cagra.0084s0051 2.0kb downstream 2.0kb downstream 3161 true Scaffold84: 199709-202869 Capsella grandiflora
Cagra.0084s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 199709-201708 Capsella grandiflora
Cagra.0084s0051 5.0kb upstream 5.0kb upstream 6161 true Scaffold84: 201709-207869 Capsella grandiflora
Cagra.0084s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 202870-207869 Capsella grandiflora
Cagra.0084s0051 5.0kb downstream 5.0kb downstream 6161 true Scaffold84: 196709-202869 Capsella grandiflora
Cagra.0084s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 196709-201708 Capsella grandiflora
Cagra.0084s0051 10.0kb upstream 10.0kb upstream 11161 true Scaffold84: 201709-212869 Capsella grandiflora
Cagra.0084s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 202870-212869 Capsella grandiflora
Cagra.0084s0051 10.0kb downstream 10.0kb downstream 11161 true Scaffold84: 191709-202869 Capsella grandiflora
Cagra.0084s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 191709-201708 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360985 5261 Brassicaceae View MSA
123833729 5264 Brassicales-Malvales View MSA
124346529 5266 SBM View MSA
124244344 5268 Malvidae View MSA
124050256 5270 Rosid View MSA
123736925 5271 Pentapetalae View MSA
122787092 5272 Eudicot View MSA
122043690 5273 Angiosperm View MSA
121347192 5274 Embryophyte View MSA
123380508 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain