Gene : Cagra.0007s0053 C. grandiflora v1.1
Defline:  (1 of 1) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Genomic Order:  53
Name:  ? Cagra.0007s0053 Secondary Identifier:  ? PAC:28903183
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0053 0.5kb upstream 0.5kb upstream 2038 true Scaffold7: 187545-189582 Capsella grandiflora
Cagra.0007s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 189083-189582 Capsella grandiflora
Cagra.0007s0053 0.5kb downstream 0.5kb downstream 2038 true Scaffold7: 187045-189082 Capsella grandiflora
Cagra.0007s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 187045-187544 Capsella grandiflora
Cagra.0007s0053 1.0kb upstream 1.0kb upstream 2538 true Scaffold7: 187545-190082 Capsella grandiflora
Cagra.0007s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 189083-190082 Capsella grandiflora
Cagra.0007s0053 1.0kb downstream 1.0kb downstream 2538 true Scaffold7: 186545-189082 Capsella grandiflora
Cagra.0007s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 186545-187544 Capsella grandiflora
Cagra.0007s0053 2.0kb upstream 2.0kb upstream 3538 true Scaffold7: 187545-191082 Capsella grandiflora
Cagra.0007s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 189083-191082 Capsella grandiflora
Cagra.0007s0053 2.0kb downstream 2.0kb downstream 3538 true Scaffold7: 185545-189082 Capsella grandiflora
Cagra.0007s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 185545-187544 Capsella grandiflora
Cagra.0007s0053 5.0kb upstream 5.0kb upstream 6538 true Scaffold7: 187545-194082 Capsella grandiflora
Cagra.0007s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 189083-194082 Capsella grandiflora
Cagra.0007s0053 5.0kb downstream 5.0kb downstream 6538 true Scaffold7: 182545-189082 Capsella grandiflora
Cagra.0007s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 182545-187544 Capsella grandiflora
Cagra.0007s0053 10.0kb upstream 10.0kb upstream 11538 true Scaffold7: 187545-199082 Capsella grandiflora
Cagra.0007s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 189083-199082 Capsella grandiflora
Cagra.0007s0053 10.0kb downstream 10.0kb downstream 11538 true Scaffold7: 177545-189082 Capsella grandiflora
Cagra.0007s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 177545-187544 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373722 5261 Brassicaceae View MSA
123836489 5264 Brassicales-Malvales View MSA
124340538 5266 SBM View MSA
124248765 5268 Malvidae View MSA
124063883 5270 Rosid View MSA
123739511 5271 Pentapetalae View MSA
122786347 5272 Eudicot View MSA
122042637 5273 Angiosperm View MSA
121346194 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain