Gene : Cagra.0007s0051 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11695:SF509 - RETICULON-4-INTERACTING PROTEIN 1 HOMOLOG, MITOCHONDRIAL Genomic Order:  51
Name:  ? Cagra.0007s0051 Secondary Identifier:  ? PAC:28903136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0051 0.5kb upstream 0.5kb upstream 2850 true Scaffold7: 178913-181762 Capsella grandiflora
Cagra.0007s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 178913-179412 Capsella grandiflora
Cagra.0007s0051 0.5kb downstream 0.5kb downstream 2850 true Scaffold7: 179413-182262 Capsella grandiflora
Cagra.0007s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 181763-182262 Capsella grandiflora
Cagra.0007s0051 1.0kb upstream 1.0kb upstream 3350 true Scaffold7: 178413-181762 Capsella grandiflora
Cagra.0007s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 178413-179412 Capsella grandiflora
Cagra.0007s0051 1.0kb downstream 1.0kb downstream 3350 true Scaffold7: 179413-182762 Capsella grandiflora
Cagra.0007s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 181763-182762 Capsella grandiflora
Cagra.0007s0051 2.0kb upstream 2.0kb upstream 4350 true Scaffold7: 177413-181762 Capsella grandiflora
Cagra.0007s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 177413-179412 Capsella grandiflora
Cagra.0007s0051 2.0kb downstream 2.0kb downstream 4350 true Scaffold7: 179413-183762 Capsella grandiflora
Cagra.0007s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 181763-183762 Capsella grandiflora
Cagra.0007s0051 5.0kb upstream 5.0kb upstream 7350 true Scaffold7: 174413-181762 Capsella grandiflora
Cagra.0007s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 174413-179412 Capsella grandiflora
Cagra.0007s0051 5.0kb downstream 5.0kb downstream 7350 true Scaffold7: 179413-186762 Capsella grandiflora
Cagra.0007s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 181763-186762 Capsella grandiflora
Cagra.0007s0051 10.0kb upstream 10.0kb upstream 12350 true Scaffold7: 169413-181762 Capsella grandiflora
Cagra.0007s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 169413-179412 Capsella grandiflora
Cagra.0007s0051 10.0kb downstream 10.0kb downstream 12350 true Scaffold7: 179413-191762 Capsella grandiflora
Cagra.0007s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 181763-191762 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380835 5261 Brassicaceae View MSA
123828998 5264 Brassicales-Malvales View MSA
124345794 5266 SBM View MSA
124240171 5268 Malvidae View MSA
124064989 5270 Rosid View MSA
123737760 5271 Pentapetalae View MSA
122788472 5272 Eudicot View MSA
122044013 5273 Angiosperm View MSA
121347528 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain