Gene : Cagra.0007s0086 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31867:SF24 - EXPANSIN-A12 Genomic Order:  86
Name:  ? Cagra.0007s0086 Secondary Identifier:  ? PAC:28903165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0086 0.5kb upstream 0.5kb upstream 1510 true Scaffold7: 292748-294257 Capsella grandiflora
Cagra.0007s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 292748-293247 Capsella grandiflora
Cagra.0007s0086 0.5kb downstream 0.5kb downstream 1510 true Scaffold7: 293248-294757 Capsella grandiflora
Cagra.0007s0086 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 294258-294757 Capsella grandiflora
Cagra.0007s0086 1.0kb upstream 1.0kb upstream 2010 true Scaffold7: 292248-294257 Capsella grandiflora
Cagra.0007s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 292248-293247 Capsella grandiflora
Cagra.0007s0086 1.0kb downstream 1.0kb downstream 2010 true Scaffold7: 293248-295257 Capsella grandiflora
Cagra.0007s0086 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 294258-295257 Capsella grandiflora
Cagra.0007s0086 2.0kb upstream 2.0kb upstream 3010 true Scaffold7: 291248-294257 Capsella grandiflora
Cagra.0007s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 291248-293247 Capsella grandiflora
Cagra.0007s0086 2.0kb downstream 2.0kb downstream 3010 true Scaffold7: 293248-296257 Capsella grandiflora
Cagra.0007s0086 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 294258-296257 Capsella grandiflora
Cagra.0007s0086 5.0kb upstream 5.0kb upstream 6010 true Scaffold7: 288248-294257 Capsella grandiflora
Cagra.0007s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 288248-293247 Capsella grandiflora
Cagra.0007s0086 5.0kb downstream 5.0kb downstream 6010 true Scaffold7: 293248-299257 Capsella grandiflora
Cagra.0007s0086 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 294258-299257 Capsella grandiflora
Cagra.0007s0086 10.0kb upstream 10.0kb upstream 11010 true Scaffold7: 283248-294257 Capsella grandiflora
Cagra.0007s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 283248-293247 Capsella grandiflora
Cagra.0007s0086 10.0kb downstream 10.0kb downstream 11010 true Scaffold7: 293248-304257 Capsella grandiflora
Cagra.0007s0086 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 294258-304257 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372431 5261 Brassicaceae View MSA
123839628 5264 Brassicales-Malvales View MSA
124342399 5266 SBM View MSA
124254378 5268 Malvidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain