Gene : Cagra.0016s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10795:SF423 - SUBTILASE FAMILY PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.0016s0003 Secondary Identifier:  ? PAC:28899564
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0016s0003 0.5kb upstream 0.5kb upstream 5857 true Scaffold16: 4359-10215 Capsella grandiflora
Cagra.0016s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold16: 9716-10215 Capsella grandiflora
Cagra.0016s0003 0.5kb downstream 0.5kb downstream 5857 true Scaffold16: 3859-9715 Capsella grandiflora
Cagra.0016s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold16: 3859-4358 Capsella grandiflora
Cagra.0016s0003 1.0kb upstream 1.0kb upstream 6357 true Scaffold16: 4359-10715 Capsella grandiflora
Cagra.0016s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold16: 9716-10715 Capsella grandiflora
Cagra.0016s0003 1.0kb downstream 1.0kb downstream 6357 true Scaffold16: 3359-9715 Capsella grandiflora
Cagra.0016s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold16: 3359-4358 Capsella grandiflora
Cagra.0016s0003 2.0kb upstream 2.0kb upstream 7357 true Scaffold16: 4359-11715 Capsella grandiflora
Cagra.0016s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold16: 9716-11715 Capsella grandiflora
Cagra.0016s0003 2.0kb downstream 2.0kb downstream 7357 true Scaffold16: 2359-9715 Capsella grandiflora
Cagra.0016s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold16: 2359-4358 Capsella grandiflora
Cagra.0016s0003 5.0kb upstream 5.0kb upstream 10357 true Scaffold16: 4359-14715 Capsella grandiflora
Cagra.0016s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold16: 9716-14715 Capsella grandiflora
Cagra.0016s0003 5.0kb downstream 5.0kb downstream 9715 true Scaffold16: 1-9715 Capsella grandiflora
Cagra.0016s0003 5.0kb downstream 5.0kb downstream 4358 false Scaffold16: 1-4358 Capsella grandiflora
Cagra.0016s0003 10.0kb upstream 10.0kb upstream 15357 true Scaffold16: 4359-19715 Capsella grandiflora
Cagra.0016s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold16: 9716-19715 Capsella grandiflora
Cagra.0016s0003 10.0kb downstream 10.0kb downstream 9715 true Scaffold16: 1-9715 Capsella grandiflora
Cagra.0016s0003 10.0kb downstream 10.0kb downstream 4358 false Scaffold16: 1-4358 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368707 5261 Brassicaceae View MSA
123830762 5264 Brassicales-Malvales View MSA
124342394 5266 SBM View MSA
124236968 5268 Malvidae View MSA
124064800 5270 Rosid View MSA
123741466 5271 Pentapetalae View MSA
122797535 5272 Eudicot View MSA
122042092 5273 Angiosperm View MSA
121350814 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain