Gene : Cagra.0022s0001 C. grandiflora v1.1
Defline:  (1 of 5) PTHR22811:SF47 - EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.0022s0001 Secondary Identifier:  ? PAC:28916115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0022s0001 0.5kb upstream 0.5kb upstream 1412 true Scaffold22: 6091-7502 Capsella grandiflora
Cagra.0022s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold22: 7003-7502 Capsella grandiflora
Cagra.0022s0001 0.5kb downstream 0.5kb downstream 1412 true Scaffold22: 5591-7002 Capsella grandiflora
Cagra.0022s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold22: 5591-6090 Capsella grandiflora
Cagra.0022s0001 1.0kb upstream 1.0kb upstream 1912 true Scaffold22: 6091-8002 Capsella grandiflora
Cagra.0022s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold22: 7003-8002 Capsella grandiflora
Cagra.0022s0001 1.0kb downstream 1.0kb downstream 1912 true Scaffold22: 5091-7002 Capsella grandiflora
Cagra.0022s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold22: 5091-6090 Capsella grandiflora
Cagra.0022s0001 2.0kb upstream 2.0kb upstream 2912 true Scaffold22: 6091-9002 Capsella grandiflora
Cagra.0022s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold22: 7003-9002 Capsella grandiflora
Cagra.0022s0001 2.0kb downstream 2.0kb downstream 2912 true Scaffold22: 4091-7002 Capsella grandiflora
Cagra.0022s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold22: 4091-6090 Capsella grandiflora
Cagra.0022s0001 5.0kb upstream 5.0kb upstream 5912 true Scaffold22: 6091-12002 Capsella grandiflora
Cagra.0022s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold22: 7003-12002 Capsella grandiflora
Cagra.0022s0001 5.0kb downstream 5.0kb downstream 5912 true Scaffold22: 1091-7002 Capsella grandiflora
Cagra.0022s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold22: 1091-6090 Capsella grandiflora
Cagra.0022s0001 10.0kb upstream 10.0kb upstream 9783 true Scaffold22: 6091-15873 Capsella grandiflora
Cagra.0022s0001 10.0kb upstream 10.0kb upstream 8871 false Scaffold22: 7003-15873 Capsella grandiflora
Cagra.0022s0001 10.0kb downstream 10.0kb downstream 7002 true Scaffold22: 1-7002 Capsella grandiflora
Cagra.0022s0001 10.0kb downstream 10.0kb downstream 6090 false Scaffold22: 1-6090 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375750 5261 Brassicaceae View MSA
123801042 5264 Brassicales-Malvales View MSA
124298387 5266 SBM View MSA
124150042 5268 Malvidae View MSA
124070301 5270 Rosid View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain