Gene : Cagra.0026s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10333 - INHIBITOR OF GROWTH PROTEIN Genomic Order:  10
Name:  ? Cagra.0026s0010 Secondary Identifier:  ? PAC:28919780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0026s0010 0.5kb upstream 0.5kb upstream 2513 true Scaffold26: 37995-40507 Capsella grandiflora
Cagra.0026s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold26: 40008-40507 Capsella grandiflora
Cagra.0026s0010 0.5kb downstream 0.5kb downstream 2513 true Scaffold26: 37495-40007 Capsella grandiflora
Cagra.0026s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold26: 37495-37994 Capsella grandiflora
Cagra.0026s0010 1.0kb upstream 1.0kb upstream 3013 true Scaffold26: 37995-41007 Capsella grandiflora
Cagra.0026s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold26: 40008-41007 Capsella grandiflora
Cagra.0026s0010 1.0kb downstream 1.0kb downstream 3013 true Scaffold26: 36995-40007 Capsella grandiflora
Cagra.0026s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold26: 36995-37994 Capsella grandiflora
Cagra.0026s0010 2.0kb upstream 2.0kb upstream 4013 true Scaffold26: 37995-42007 Capsella grandiflora
Cagra.0026s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold26: 40008-42007 Capsella grandiflora
Cagra.0026s0010 2.0kb downstream 2.0kb downstream 4013 true Scaffold26: 35995-40007 Capsella grandiflora
Cagra.0026s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold26: 35995-37994 Capsella grandiflora
Cagra.0026s0010 5.0kb upstream 5.0kb upstream 7013 true Scaffold26: 37995-45007 Capsella grandiflora
Cagra.0026s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold26: 40008-45007 Capsella grandiflora
Cagra.0026s0010 5.0kb downstream 5.0kb downstream 7013 true Scaffold26: 32995-40007 Capsella grandiflora
Cagra.0026s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold26: 32995-37994 Capsella grandiflora
Cagra.0026s0010 10.0kb upstream 10.0kb upstream 12013 true Scaffold26: 37995-50007 Capsella grandiflora
Cagra.0026s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold26: 40008-50007 Capsella grandiflora
Cagra.0026s0010 10.0kb downstream 10.0kb downstream 12013 true Scaffold26: 27995-40007 Capsella grandiflora
Cagra.0026s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold26: 27995-37994 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364222 5261 Brassicaceae View MSA
123833734 5264 Brassicales-Malvales View MSA
124341847 5266 SBM View MSA
124237931 5268 Malvidae View MSA
124063060 5270 Rosid View MSA
123742786 5271 Pentapetalae View MSA
122789662 5272 Eudicot View MSA
122046688 5273 Angiosperm View MSA
121343863 5274 Embryophyte View MSA
123426604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain