Gene : Cagra.0004s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10566//PTHR10566:SF93 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED Genomic Order:  1
Name:  ? Cagra.0004s0001 Secondary Identifier:  ? PAC:28915995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0004s0001 0.5kb upstream 0.5kb upstream 4070 true Scaffold4: 1600-5669 Capsella grandiflora
Cagra.0004s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4: 1600-2099 Capsella grandiflora
Cagra.0004s0001 0.5kb downstream 0.5kb downstream 4070 true Scaffold4: 2100-6169 Capsella grandiflora
Cagra.0004s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4: 5670-6169 Capsella grandiflora
Cagra.0004s0001 1.0kb upstream 1.0kb upstream 4570 true Scaffold4: 1100-5669 Capsella grandiflora
Cagra.0004s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4: 1100-2099 Capsella grandiflora
Cagra.0004s0001 1.0kb downstream 1.0kb downstream 4570 true Scaffold4: 2100-6669 Capsella grandiflora
Cagra.0004s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4: 5670-6669 Capsella grandiflora
Cagra.0004s0001 2.0kb upstream 2.0kb upstream 5570 true Scaffold4: 100-5669 Capsella grandiflora
Cagra.0004s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4: 100-2099 Capsella grandiflora
Cagra.0004s0001 2.0kb downstream 2.0kb downstream 5570 true Scaffold4: 2100-7669 Capsella grandiflora
Cagra.0004s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4: 5670-7669 Capsella grandiflora
Cagra.0004s0001 5.0kb upstream 5.0kb upstream 5669 true Scaffold4: 1-5669 Capsella grandiflora
Cagra.0004s0001 5.0kb upstream 5.0kb upstream 2099 false Scaffold4: 1-2099 Capsella grandiflora
Cagra.0004s0001 5.0kb downstream 5.0kb downstream 8570 true Scaffold4: 2100-10669 Capsella grandiflora
Cagra.0004s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4: 5670-10669 Capsella grandiflora
Cagra.0004s0001 10.0kb upstream 10.0kb upstream 5669 true Scaffold4: 1-5669 Capsella grandiflora
Cagra.0004s0001 10.0kb upstream 10.0kb upstream 2099 false Scaffold4: 1-2099 Capsella grandiflora
Cagra.0004s0001 10.0kb downstream 10.0kb downstream 13570 true Scaffold4: 2100-15669 Capsella grandiflora
Cagra.0004s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4: 5670-15669 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510604 5273 Angiosperm View MSA
122365974 5261 Brassicaceae View MSA
123799081 5264 Brassicales-Malvales View MSA
124296639 5266 SBM View MSA
124148732 5268 Malvidae View MSA
123874671 5270 Rosid View MSA
123458607 5271 Pentapetalae View MSA
122494010 5272 Eudicot View MSA
120783696 5274 Embryophyte View MSA
123428037 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain