Gene : Cagra.0007s0001 C. grandiflora v1.1
Defline:  (1 of 15) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  1
Name:  ? Cagra.0007s0001 Secondary Identifier:  ? PAC:28903180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0001 0.5kb upstream 0.5kb upstream 1133 true Scaffold7: 368-1500 Capsella grandiflora
Cagra.0007s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 1001-1500 Capsella grandiflora
Cagra.0007s0001 0.5kb downstream 0.5kb downstream 1000 true Scaffold7: 1-1000 Capsella grandiflora
Cagra.0007s0001 0.5kb downstream 0.5kb downstream 367 false Scaffold7: 1-367 Capsella grandiflora
Cagra.0007s0001 1.0kb upstream 1.0kb upstream 1633 true Scaffold7: 368-2000 Capsella grandiflora
Cagra.0007s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 1001-2000 Capsella grandiflora
Cagra.0007s0001 1.0kb downstream 1.0kb downstream 1000 true Scaffold7: 1-1000 Capsella grandiflora
Cagra.0007s0001 1.0kb downstream 1.0kb downstream 367 false Scaffold7: 1-367 Capsella grandiflora
Cagra.0007s0001 2.0kb upstream 2.0kb upstream 2633 true Scaffold7: 368-3000 Capsella grandiflora
Cagra.0007s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 1001-3000 Capsella grandiflora
Cagra.0007s0001 2.0kb downstream 2.0kb downstream 1000 true Scaffold7: 1-1000 Capsella grandiflora
Cagra.0007s0001 2.0kb downstream 2.0kb downstream 367 false Scaffold7: 1-367 Capsella grandiflora
Cagra.0007s0001 5.0kb upstream 5.0kb upstream 5633 true Scaffold7: 368-6000 Capsella grandiflora
Cagra.0007s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 1001-6000 Capsella grandiflora
Cagra.0007s0001 5.0kb downstream 5.0kb downstream 1000 true Scaffold7: 1-1000 Capsella grandiflora
Cagra.0007s0001 5.0kb downstream 5.0kb downstream 367 false Scaffold7: 1-367 Capsella grandiflora
Cagra.0007s0001 10.0kb upstream 10.0kb upstream 10633 true Scaffold7: 368-11000 Capsella grandiflora
Cagra.0007s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 1001-11000 Capsella grandiflora
Cagra.0007s0001 10.0kb downstream 10.0kb downstream 1000 true Scaffold7: 1-1000 Capsella grandiflora
Cagra.0007s0001 10.0kb downstream 10.0kb downstream 367 false Scaffold7: 1-367 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334211 5261 Brassicaceae Singleton cluster - no MSA
123775074 5264 Brassicales-Malvales Singleton cluster - no MSA
124273490 5266 SBM Singleton cluster - no MSA
124254682 5268 Malvidae View MSA
124074530 5270 Rosid View MSA
123753426 5271 Pentapetalae View MSA
122797901 5272 Eudicot View MSA
122051661 5273 Angiosperm View MSA
121351720 5274 Embryophyte View MSA
123382290 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain