Gene : Cagra.0007s0006 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10052//PTHR10052:SF9 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  6
Name:  ? Cagra.0007s0006 Secondary Identifier:  ? PAC:28903189
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0006 0.5kb upstream 0.5kb upstream 1811 true Scaffold7: 27562-29372 Capsella grandiflora
Cagra.0007s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 27562-28061 Capsella grandiflora
Cagra.0007s0006 0.5kb downstream 0.5kb downstream 1811 true Scaffold7: 28062-29872 Capsella grandiflora
Cagra.0007s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 29373-29872 Capsella grandiflora
Cagra.0007s0006 1.0kb upstream 1.0kb upstream 2311 true Scaffold7: 27062-29372 Capsella grandiflora
Cagra.0007s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 27062-28061 Capsella grandiflora
Cagra.0007s0006 1.0kb downstream 1.0kb downstream 2311 true Scaffold7: 28062-30372 Capsella grandiflora
Cagra.0007s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 29373-30372 Capsella grandiflora
Cagra.0007s0006 2.0kb upstream 2.0kb upstream 3311 true Scaffold7: 26062-29372 Capsella grandiflora
Cagra.0007s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 26062-28061 Capsella grandiflora
Cagra.0007s0006 2.0kb downstream 2.0kb downstream 3311 true Scaffold7: 28062-31372 Capsella grandiflora
Cagra.0007s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 29373-31372 Capsella grandiflora
Cagra.0007s0006 5.0kb upstream 5.0kb upstream 6311 true Scaffold7: 23062-29372 Capsella grandiflora
Cagra.0007s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 23062-28061 Capsella grandiflora
Cagra.0007s0006 5.0kb downstream 5.0kb downstream 6311 true Scaffold7: 28062-34372 Capsella grandiflora
Cagra.0007s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 29373-34372 Capsella grandiflora
Cagra.0007s0006 10.0kb upstream 10.0kb upstream 11311 true Scaffold7: 18062-29372 Capsella grandiflora
Cagra.0007s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 18062-28061 Capsella grandiflora
Cagra.0007s0006 10.0kb downstream 10.0kb downstream 11311 true Scaffold7: 28062-39372 Capsella grandiflora
Cagra.0007s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 29373-39372 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026385 5273 Angiosperm View MSA
122366066 5261 Brassicaceae View MSA
123799101 5264 Brassicales-Malvales View MSA
124296654 5266 SBM View MSA
124148745 5268 Malvidae View MSA
123874683 5270 Rosid View MSA
123646700 5271 Pentapetalae View MSA
122680758 5272 Eudicot View MSA
121350772 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain