Gene : Cagra.0007s0022 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12741:SF22 - CALLOSE SYNTHASE 8-RELATED Genomic Order:  22
Name:  ? Cagra.0007s0022 Secondary Identifier:  ? PAC:28903175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6773 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0022 0.5kb upstream 0.5kb upstream 2054 true Scaffold7: 66387-68440 Capsella grandiflora
Cagra.0007s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 67941-68440 Capsella grandiflora
Cagra.0007s0022 0.5kb downstream 0.5kb downstream 2054 true Scaffold7: 65887-67940 Capsella grandiflora
Cagra.0007s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 65887-66386 Capsella grandiflora
Cagra.0007s0022 1.0kb upstream 1.0kb upstream 2554 true Scaffold7: 66387-68940 Capsella grandiflora
Cagra.0007s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 67941-68940 Capsella grandiflora
Cagra.0007s0022 1.0kb downstream 1.0kb downstream 2554 true Scaffold7: 65387-67940 Capsella grandiflora
Cagra.0007s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 65387-66386 Capsella grandiflora
Cagra.0007s0022 2.0kb upstream 2.0kb upstream 3554 true Scaffold7: 66387-69940 Capsella grandiflora
Cagra.0007s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 67941-69940 Capsella grandiflora
Cagra.0007s0022 2.0kb downstream 2.0kb downstream 3554 true Scaffold7: 64387-67940 Capsella grandiflora
Cagra.0007s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 64387-66386 Capsella grandiflora
Cagra.0007s0022 5.0kb upstream 5.0kb upstream 6554 true Scaffold7: 66387-72940 Capsella grandiflora
Cagra.0007s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 67941-72940 Capsella grandiflora
Cagra.0007s0022 5.0kb downstream 5.0kb downstream 6554 true Scaffold7: 61387-67940 Capsella grandiflora
Cagra.0007s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 61387-66386 Capsella grandiflora
Cagra.0007s0022 10.0kb upstream 10.0kb upstream 11554 true Scaffold7: 66387-77940 Capsella grandiflora
Cagra.0007s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 67941-77940 Capsella grandiflora
Cagra.0007s0022 10.0kb downstream 10.0kb downstream 11554 true Scaffold7: 56387-67940 Capsella grandiflora
Cagra.0007s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 56387-66386 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338301 5261 Brassicaceae View MSA
123778893 5264 Brassicales-Malvales View MSA
124277229 5266 SBM View MSA
124249869 5268 Malvidae View MSA
123952435 5270 Rosid View MSA
123530225 5271 Pentapetalae View MSA
122565195 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain