Gene : Cagra.0007s0014 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14152:SF5 - U4/U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 1 Genomic Order:  14
Name:  ? Cagra.0007s0014 Secondary Identifier:  ? PAC:28903166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0014 0.5kb upstream 0.5kb upstream 1211 true Scaffold7: 43746-44956 Capsella grandiflora
Cagra.0007s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 43746-44245 Capsella grandiflora
Cagra.0007s0014 0.5kb downstream 0.5kb downstream 1211 true Scaffold7: 44246-45456 Capsella grandiflora
Cagra.0007s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 44957-45456 Capsella grandiflora
Cagra.0007s0014 1.0kb upstream 1.0kb upstream 1711 true Scaffold7: 43246-44956 Capsella grandiflora
Cagra.0007s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 43246-44245 Capsella grandiflora
Cagra.0007s0014 1.0kb downstream 1.0kb downstream 1711 true Scaffold7: 44246-45956 Capsella grandiflora
Cagra.0007s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 44957-45956 Capsella grandiflora
Cagra.0007s0014 2.0kb upstream 2.0kb upstream 2711 true Scaffold7: 42246-44956 Capsella grandiflora
Cagra.0007s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 42246-44245 Capsella grandiflora
Cagra.0007s0014 2.0kb downstream 2.0kb downstream 2711 true Scaffold7: 44246-46956 Capsella grandiflora
Cagra.0007s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 44957-46956 Capsella grandiflora
Cagra.0007s0014 5.0kb upstream 5.0kb upstream 5711 true Scaffold7: 39246-44956 Capsella grandiflora
Cagra.0007s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 39246-44245 Capsella grandiflora
Cagra.0007s0014 5.0kb downstream 5.0kb downstream 5711 true Scaffold7: 44246-49956 Capsella grandiflora
Cagra.0007s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 44957-49956 Capsella grandiflora
Cagra.0007s0014 10.0kb upstream 10.0kb upstream 10711 true Scaffold7: 34246-44956 Capsella grandiflora
Cagra.0007s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 34246-44245 Capsella grandiflora
Cagra.0007s0014 10.0kb downstream 10.0kb downstream 10711 true Scaffold7: 44246-54956 Capsella grandiflora
Cagra.0007s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 44957-54956 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027698 5273 Angiosperm View MSA
124149810 5268 Malvidae View MSA
122374163 5261 Brassicaceae View MSA
123800694 5264 Brassicales-Malvales View MSA
124298074 5266 SBM View MSA
123875543 5270 Rosid View MSA
123459344 5271 Pentapetalae View MSA
122494736 5272 Eudicot View MSA
121297317 5274 Embryophyte View MSA
123335386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain