Gene : Cagra.0007s0048 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24073:SF553 - RAS-RELATED PROTEIN RABA1G Genomic Order:  48
Name:  ? Cagra.0007s0048 Secondary Identifier:  ? PAC:28903200
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0048 0.5kb upstream 0.5kb upstream 1669 true Scaffold7: 170738-172406 Capsella grandiflora
Cagra.0007s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 170738-171237 Capsella grandiflora
Cagra.0007s0048 0.5kb downstream 0.5kb downstream 1669 true Scaffold7: 171238-172906 Capsella grandiflora
Cagra.0007s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 172407-172906 Capsella grandiflora
Cagra.0007s0048 1.0kb upstream 1.0kb upstream 2169 true Scaffold7: 170238-172406 Capsella grandiflora
Cagra.0007s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 170238-171237 Capsella grandiflora
Cagra.0007s0048 1.0kb downstream 1.0kb downstream 2169 true Scaffold7: 171238-173406 Capsella grandiflora
Cagra.0007s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 172407-173406 Capsella grandiflora
Cagra.0007s0048 2.0kb upstream 2.0kb upstream 3169 true Scaffold7: 169238-172406 Capsella grandiflora
Cagra.0007s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 169238-171237 Capsella grandiflora
Cagra.0007s0048 2.0kb downstream 2.0kb downstream 3169 true Scaffold7: 171238-174406 Capsella grandiflora
Cagra.0007s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 172407-174406 Capsella grandiflora
Cagra.0007s0048 5.0kb upstream 5.0kb upstream 6169 true Scaffold7: 166238-172406 Capsella grandiflora
Cagra.0007s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 166238-171237 Capsella grandiflora
Cagra.0007s0048 5.0kb downstream 5.0kb downstream 6169 true Scaffold7: 171238-177406 Capsella grandiflora
Cagra.0007s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 172407-177406 Capsella grandiflora
Cagra.0007s0048 10.0kb upstream 10.0kb upstream 11169 true Scaffold7: 161238-172406 Capsella grandiflora
Cagra.0007s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 161238-171237 Capsella grandiflora
Cagra.0007s0048 10.0kb downstream 10.0kb downstream 11169 true Scaffold7: 171238-182406 Capsella grandiflora
Cagra.0007s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 172407-182406 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360643 5261 Brassicaceae View MSA
123797995 5264 Brassicales-Malvales View MSA
124295686 5266 SBM View MSA
124148058 5268 Malvidae View MSA
123874136 5270 Rosid View MSA
123458152 5271 Pentapetalae View MSA
122796076 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain