Gene : Cagra.0448s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31442:SF6 - DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  13
Name:  ? Cagra.0448s0013 Secondary Identifier:  ? PAC:28906328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0013 0.5kb upstream 0.5kb upstream 2736 true Scaffold448: 45170-47905 Capsella grandiflora
Cagra.0448s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 45170-45669 Capsella grandiflora
Cagra.0448s0013 0.5kb downstream 0.5kb downstream 2736 true Scaffold448: 45670-48405 Capsella grandiflora
Cagra.0448s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 47906-48405 Capsella grandiflora
Cagra.0448s0013 1.0kb upstream 1.0kb upstream 3236 true Scaffold448: 44670-47905 Capsella grandiflora
Cagra.0448s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 44670-45669 Capsella grandiflora
Cagra.0448s0013 1.0kb downstream 1.0kb downstream 3236 true Scaffold448: 45670-48905 Capsella grandiflora
Cagra.0448s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 47906-48905 Capsella grandiflora
Cagra.0448s0013 2.0kb upstream 2.0kb upstream 4236 true Scaffold448: 43670-47905 Capsella grandiflora
Cagra.0448s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 43670-45669 Capsella grandiflora
Cagra.0448s0013 2.0kb downstream 2.0kb downstream 4236 true Scaffold448: 45670-49905 Capsella grandiflora
Cagra.0448s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 47906-49905 Capsella grandiflora
Cagra.0448s0013 5.0kb upstream 5.0kb upstream 7236 true Scaffold448: 40670-47905 Capsella grandiflora
Cagra.0448s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 40670-45669 Capsella grandiflora
Cagra.0448s0013 5.0kb downstream 5.0kb downstream 7236 true Scaffold448: 45670-52905 Capsella grandiflora
Cagra.0448s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 47906-52905 Capsella grandiflora
Cagra.0448s0013 10.0kb upstream 10.0kb upstream 12236 true Scaffold448: 35670-47905 Capsella grandiflora
Cagra.0448s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 35670-45669 Capsella grandiflora
Cagra.0448s0013 10.0kb downstream 10.0kb downstream 12236 true Scaffold448: 45670-57905 Capsella grandiflora
Cagra.0448s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 47906-57905 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366904 5261 Brassicaceae View MSA
123836484 5264 Brassicales-Malvales View MSA
124340592 5266 SBM View MSA
124244140 5268 Malvidae View MSA
124067582 5270 Rosid View MSA
123746852 5271 Pentapetalae View MSA
122794085 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain