Gene : Cagra.0448s0012 C. grandiflora v1.1
Defline:  (1 of 5) PF11523 - Protein of unknown function (DUF3223) (DUF3223) Genomic Order:  12
Name:  ? Cagra.0448s0012 Secondary Identifier:  ? PAC:28906307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0012 0.5kb upstream 0.5kb upstream 2093 true Scaffold448: 43335-45427 Capsella grandiflora
Cagra.0448s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 44928-45427 Capsella grandiflora
Cagra.0448s0012 0.5kb downstream 0.5kb downstream 2093 true Scaffold448: 42835-44927 Capsella grandiflora
Cagra.0448s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 42835-43334 Capsella grandiflora
Cagra.0448s0012 1.0kb upstream 1.0kb upstream 2593 true Scaffold448: 43335-45927 Capsella grandiflora
Cagra.0448s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 44928-45927 Capsella grandiflora
Cagra.0448s0012 1.0kb downstream 1.0kb downstream 2593 true Scaffold448: 42335-44927 Capsella grandiflora
Cagra.0448s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 42335-43334 Capsella grandiflora
Cagra.0448s0012 2.0kb upstream 2.0kb upstream 3593 true Scaffold448: 43335-46927 Capsella grandiflora
Cagra.0448s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 44928-46927 Capsella grandiflora
Cagra.0448s0012 2.0kb downstream 2.0kb downstream 3593 true Scaffold448: 41335-44927 Capsella grandiflora
Cagra.0448s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 41335-43334 Capsella grandiflora
Cagra.0448s0012 5.0kb upstream 5.0kb upstream 6593 true Scaffold448: 43335-49927 Capsella grandiflora
Cagra.0448s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 44928-49927 Capsella grandiflora
Cagra.0448s0012 5.0kb downstream 5.0kb downstream 6593 true Scaffold448: 38335-44927 Capsella grandiflora
Cagra.0448s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 38335-43334 Capsella grandiflora
Cagra.0448s0012 10.0kb upstream 10.0kb upstream 11593 true Scaffold448: 43335-54927 Capsella grandiflora
Cagra.0448s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 44928-54927 Capsella grandiflora
Cagra.0448s0012 10.0kb downstream 10.0kb downstream 11593 true Scaffold448: 33335-44927 Capsella grandiflora
Cagra.0448s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 33335-43334 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364655 5261 Brassicaceae View MSA
123830508 5264 Brassicales-Malvales View MSA
124337049 5266 SBM View MSA
124253591 5268 Malvidae View MSA
124065734 5270 Rosid View MSA
123737001 5271 Pentapetalae View MSA
122786246 5272 Eudicot View MSA
122047145 5273 Angiosperm View MSA
121351561 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain