Gene : Cagra.0448s0037 C. grandiflora v1.1
Defline:  (1 of 2) 2.4.1.1 - Glycogen phosphorylase / Polyphosphorylase Genomic Order:  37
Name:  ? Cagra.0448s0037 Secondary Identifier:  ? PAC:28906350
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7238 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0037 0.5kb upstream 0.5kb upstream 5239 true Scaffold448: 131982-137220 Capsella grandiflora
Cagra.0448s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 136721-137220 Capsella grandiflora
Cagra.0448s0037 0.5kb downstream 0.5kb downstream 5239 true Scaffold448: 131482-136720 Capsella grandiflora
Cagra.0448s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 131482-131981 Capsella grandiflora
Cagra.0448s0037 1.0kb upstream 1.0kb upstream 5739 true Scaffold448: 131982-137720 Capsella grandiflora
Cagra.0448s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 136721-137720 Capsella grandiflora
Cagra.0448s0037 1.0kb downstream 1.0kb downstream 5739 true Scaffold448: 130982-136720 Capsella grandiflora
Cagra.0448s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 130982-131981 Capsella grandiflora
Cagra.0448s0037 2.0kb upstream 2.0kb upstream 6739 true Scaffold448: 131982-138720 Capsella grandiflora
Cagra.0448s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 136721-138720 Capsella grandiflora
Cagra.0448s0037 2.0kb downstream 2.0kb downstream 6739 true Scaffold448: 129982-136720 Capsella grandiflora
Cagra.0448s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 129982-131981 Capsella grandiflora
Cagra.0448s0037 5.0kb upstream 5.0kb upstream 9739 true Scaffold448: 131982-141720 Capsella grandiflora
Cagra.0448s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 136721-141720 Capsella grandiflora
Cagra.0448s0037 5.0kb downstream 5.0kb downstream 9739 true Scaffold448: 126982-136720 Capsella grandiflora
Cagra.0448s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 126982-131981 Capsella grandiflora
Cagra.0448s0037 10.0kb upstream 10.0kb upstream 14739 true Scaffold448: 131982-146720 Capsella grandiflora
Cagra.0448s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 136721-146720 Capsella grandiflora
Cagra.0448s0037 10.0kb downstream 10.0kb downstream 14739 true Scaffold448: 121982-136720 Capsella grandiflora
Cagra.0448s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 121982-131981 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366287 5261 Brassicaceae View MSA
123834640 5264 Brassicales-Malvales View MSA
124341676 5266 SBM View MSA
124237010 5268 Malvidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain