Gene : Cagra.0001s0006 C. grandiflora v1.1
Defline:  (1 of 12) PF01699 - Sodium/calcium exchanger protein (Na_Ca_ex) Genomic Order:  6
Name:  ? Cagra.0001s0006 Secondary Identifier:  ? PAC:28894716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0001s0006 0.5kb upstream 0.5kb upstream 3898 true Scaffold1: 21875-25772 Capsella grandiflora
Cagra.0001s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1: 21875-22374 Capsella grandiflora
Cagra.0001s0006 0.5kb downstream 0.5kb downstream 3898 true Scaffold1: 22375-26272 Capsella grandiflora
Cagra.0001s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1: 25773-26272 Capsella grandiflora
Cagra.0001s0006 1.0kb upstream 1.0kb upstream 4398 true Scaffold1: 21375-25772 Capsella grandiflora
Cagra.0001s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1: 21375-22374 Capsella grandiflora
Cagra.0001s0006 1.0kb downstream 1.0kb downstream 4398 true Scaffold1: 22375-26772 Capsella grandiflora
Cagra.0001s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1: 25773-26772 Capsella grandiflora
Cagra.0001s0006 2.0kb upstream 2.0kb upstream 5398 true Scaffold1: 20375-25772 Capsella grandiflora
Cagra.0001s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1: 20375-22374 Capsella grandiflora
Cagra.0001s0006 2.0kb downstream 2.0kb downstream 5398 true Scaffold1: 22375-27772 Capsella grandiflora
Cagra.0001s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1: 25773-27772 Capsella grandiflora
Cagra.0001s0006 5.0kb upstream 5.0kb upstream 8398 true Scaffold1: 17375-25772 Capsella grandiflora
Cagra.0001s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1: 17375-22374 Capsella grandiflora
Cagra.0001s0006 5.0kb downstream 5.0kb downstream 8398 true Scaffold1: 22375-30772 Capsella grandiflora
Cagra.0001s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1: 25773-30772 Capsella grandiflora
Cagra.0001s0006 10.0kb upstream 10.0kb upstream 13398 true Scaffold1: 12375-25772 Capsella grandiflora
Cagra.0001s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1: 12375-22374 Capsella grandiflora
Cagra.0001s0006 10.0kb downstream 10.0kb downstream 13398 true Scaffold1: 22375-35772 Capsella grandiflora
Cagra.0001s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1: 25773-35772 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377115 5261 Brassicaceae View MSA
123801446 5264 Brassicales-Malvales View MSA
124348373 5266 SBM View MSA
124251400 5268 Malvidae View MSA
124071439 5270 Rosid View MSA
123747660 5271 Pentapetalae View MSA
122792881 5272 Eudicot View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain