Gene : Cagra.0001s0011 C. grandiflora v1.1
Defline:  (1 of 26) PF07723//PF08387 - Leucine Rich Repeat (LRR_2) // FBD (FBD) Genomic Order:  11
Name:  ? Cagra.0001s0011 Secondary Identifier:  ? PAC:28894724
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0001s0011 0.5kb upstream 0.5kb upstream 1996 true Scaffold1: 45297-47292 Capsella grandiflora
Cagra.0001s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1: 46793-47292 Capsella grandiflora
Cagra.0001s0011 0.5kb downstream 0.5kb downstream 1996 true Scaffold1: 44797-46792 Capsella grandiflora
Cagra.0001s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1: 44797-45296 Capsella grandiflora
Cagra.0001s0011 1.0kb upstream 1.0kb upstream 2496 true Scaffold1: 45297-47792 Capsella grandiflora
Cagra.0001s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1: 46793-47792 Capsella grandiflora
Cagra.0001s0011 1.0kb downstream 1.0kb downstream 2496 true Scaffold1: 44297-46792 Capsella grandiflora
Cagra.0001s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1: 44297-45296 Capsella grandiflora
Cagra.0001s0011 2.0kb upstream 2.0kb upstream 3496 true Scaffold1: 45297-48792 Capsella grandiflora
Cagra.0001s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1: 46793-48792 Capsella grandiflora
Cagra.0001s0011 2.0kb downstream 2.0kb downstream 3496 true Scaffold1: 43297-46792 Capsella grandiflora
Cagra.0001s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1: 43297-45296 Capsella grandiflora
Cagra.0001s0011 5.0kb upstream 5.0kb upstream 6496 true Scaffold1: 45297-51792 Capsella grandiflora
Cagra.0001s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1: 46793-51792 Capsella grandiflora
Cagra.0001s0011 5.0kb downstream 5.0kb downstream 6496 true Scaffold1: 40297-46792 Capsella grandiflora
Cagra.0001s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1: 40297-45296 Capsella grandiflora
Cagra.0001s0011 10.0kb upstream 10.0kb upstream 11496 true Scaffold1: 45297-56792 Capsella grandiflora
Cagra.0001s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1: 46793-56792 Capsella grandiflora
Cagra.0001s0011 10.0kb downstream 10.0kb downstream 11496 true Scaffold1: 35297-46792 Capsella grandiflora
Cagra.0001s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1: 35297-45296 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378628 5261 Brassicaceae View MSA
123801939 5264 Brassicales-Malvales View MSA
124299185 5266 SBM View MSA
124150666 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain